Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2646 ATGGCGGACACTGTCGTTAGCTCCCTCCTTCAGAACTTGTCACAGCTTCTGGGCGATGAATTCAAGTTGCTTTCGGGCGTGAAGGACAGAATCAATTCACTTAGGAATGACCTCAGGTTTATAGACATCTTCCTCAAGAGATCCATGGGTAACCGCAACGACGAGCTTGTCAAAGAAGTGGTCAACCAAATCAGAGACGTCGCCTTTAAGGCCGAGGATGTTGTTGACATCTACGTTGCCAGAATTGCCGAACATAGAAGCAGAAACACAGTGAGCAAGTTATTCCACTTAAAAGAACGTTTCATGGTGCTTCACGAAGTCAATGATGAGATAGAGAAGATCAAGAACCGTATTGAAGAGATCTATAAAAACAGGGAGAGATACTGTATCACAGAACGTGCATCCACAGGTGAAGATGTTGATGCTATTGCTGCTGCTGAATCACTCCGCGAAAGGAGGAAGGACGTGGAAGAAAAAGACGTAGTGGGGTTCGTGAATGACTTAAACTTCGTGATTAAGAAGCTCGTGGAAGAGGGTGATTCAGGTCGCAAAGTTGCTTCCATAATCGGCATGGGAGGGTTGGGTAAGACCACTTTTGCCCGAAAGATTTATAACAACGAACAAGTGAAGAACTGCTTTCCTCTTCGTGCATGGGGTTATGTGTCCAACGATTATAGAGCGAGGGAACTTTTGCTGAGCCTTCTCAAGTGTTTGCTGTCCATCTCTGAATATGATGGTTTGTTCAAGAAGAAGGAAGATGAAGTTGAAGATATTGCTGGAAGTGAGGAAAAATTGAAGACAAAGGTGAGAGAATGCTTGAAGGGGAAGAAGTACCTTGTAGTGCTTGATGATATATGGAAAATTGAAGTGTGGAACAGCATAGAGGATGCCTTCCCAGACGATGATGATGGCAGCGTTGGCAGAATACTGATAACTAGTCGTGAAATGGAAGTCGCAAACTATGTTGGAACCGTATCTCCCTACCACCTTCCCTTTCTCAATGTAGAAGAAAGTTGGCATCTCTTCTCTAAGAAAGTGTTTCGAGGTAATGAGTGTCCGTCAGATCTCGAGCCTCTCGGTAGATCCATTGTTGAGACTTGCAAGGGCTTGCCACTTGCCATTGTGGTCTTGGCTGGACATGCGTCGAAGAAAGAGAAGTCAGTAAGAGAGTGGACAAGAATCAAGAAGATCACTTGGGATCTTACTCAAGACAAAATGAAAGTGATGGATATACTAAAGCTTAGCTACGACAGCCTGCCTCAAAGATTGAAACCATGCTTTCTGTATTTTGGAATCTATCCCGAGGACTATGAGATCAGGGCGAGGGATGTGATCCAAATGTGGATTGCTGAAGGGTTCATTCAACCGCAAGAAGCTAGAATCCAAGGTGCAGCTGAACCAGAAGATGTTGCAGAGTATTACTTGGATGAGCTAGTGGATCGCAGCCTGGTGCAAGTGGCAAGCAGGAAGAGCGATGGGCGTGTCAAGACATGTCAAATTCATGATCTTCTCCGCGATCTCTGCATTTCAGAGAGCAAATCAGAGAAGTTTATGGAGGTTTGCAGAGATCCCAACGACATGGATACCGTGAGCAATGCTAATCCTCGTAGATTGTCCATCCAATGCAAGGAATGGTCTAATTTCTCTACAAACAATTTGAATCAGTTGTGCACTCGTTCCTTGTTCTTCTTTTCTGAGGGGGAAATGTTCCGAGAGGATGTTCGTCTGGAAAGCTTCAAGTTGGCTCGCGTGATATGTTCAAACACCGAAAGATACTACTATAATTCAGCACTCATGATTGATTTCAAGAAAATGATCCATCTAAGGTACTTGAGAATAGATGCAAGGGCGATTAGCATTCCAGCTTCTGTACGCAACCTCAGGAATCTAGAAACACTCGATGTACGTGGTGCAGAGATGGTCTCCAACGAAATTTGGAAGCTCAAGCGACTGAAACATCTTTATATAAGGAATGTTGAGAAGATACAAGTCCTACCAAAATCACAAAGGAAAATAAAGGGAAACTTGCAAACCCTCTTGTTAAGATGTTATAAGAGTGAAGATTTGGTGTCCCTGCTAAACAATGACATATTTCCCAGGTTGAGAAATCTAGTGTTATTTTCTGAGGATTATTTTCGCCACGAACCCTTACCTAGTCTAAACCACCTCCCCAATCTCCATAGCCTCAAAATTAATAACTCTCAAGAACTTCCATCAGACGCAAATGTGTTTCCATCAAATCTTACAAAGATAACCCTCCATGGTTTCATGCAGCCGGGGAATGTACTCATATTTTTGAAGAATATGAAGACTGTAGGACAGCTTGCCAGCCTCCAAATTTTGAAACTAAAAGTGGATATACGGACTGACTTTAATGTTGGCGCTGGAGAGTTCCCACGACTTAAAGTGTTTCAGATGAGTAAAATGAGGGTCAGAAGTTGGACATTAGAGAAAGGTGCAATGCCGTGTCTCCAAAATCTGGTAATCGAGAACTGCGATAAGTTGGAAGAGATTCCTGAAGAACTCTGGTCGTTGACTACCTTACGAGAAGTGCAGCTTTCGAACGCCAACAAAAGATTAGCTGACAGACTCCGAAGCGTTGAATTGAAGAACGGTTGTAAGCTCATACTCTCGGAACTTAGTCCGAAGAAGAGGATATAA 2661 0.434 MADTVVSSLLQNLSQLLGDEFKLLSGVKDRINSLRNDLRFIDIFLKRSMGNRNDELVKEVVNQIRDVAFKAEDVVDIYVARIAEHRSRNTVSKLFHLKERFMVLHEVNDEIEKIKNRIEEIYKNRERYCITERASTGEDVDAIAAAESLRERRKDVEEKDVVGFVNDLNFVIKKLVEEGDSGRKVASIIGMGGLGKTTFARKIYNNEQVKNCFPLRAWGYVSNDYRARELLLSLLKCLLSISEYDGLFKKKEDEVEDIAGSEEKLKTKVRECLKGKKYLVVLDDIWKIEVWNSIEDAFPDDDDGSVGRILITSREMEVANYVGTVSPYHLPFLNVEESWHLFSKKVFRGNECPSDLEPLGRSIVETCKGLPLAIVVLAGHASKKEKSVREWTRIKKITWDLTQDKMKVMDILKLSYDSLPQRLKPCFLYFGIYPEDYEIRARDVIQMWIAEGFIQPQEARIQGAAEPEDVAEYYLDELVDRSLVQVASRKSDGRVKTCQIHDLLRDLCISESKSEKFMEVCRDPNDMDTVSNANPRRLSIQCKEWSNFSTNNLNQLCTRSLFFFSEGEMFREDVRLESFKLARVICSNTERYYYNSALMIDFKKMIHLRYLRIDARAISIPASVRNLRNLETLDVRGAEMVSNEIWKLKRLKHLYIRNVEKIQVLPKSQRKIKGNLQTLLLRCYKSEDLVSLLNNDIFPRLRNLVLFSEDYFRHEPLPSLNHLPNLHSLKINNSQELPSDANVFPSNLTKITLHGFMQPGNVLIFLKNMKTVGQLASLQILKLKVDIRTDFNVGAGEFPRLKVFQMSKMRVRSWTLEKGAMPCLQNLVIENCDKLEEIPEELWSLTTLREVQLSNANKRLADRLRSVELKNGCKLILSELSPKKRI* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2646 886 Pfam NB-ARC domain 168 417 IPR002182 GO:0043531
Apr4g2646 886 Gene3D - 421 510 IPR036388 -
Apr4g2646 886 Gene3D - 332 420 IPR042197 -
Apr4g2646 886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 430 IPR027417 -
Apr4g2646 886 Gene3D - 141 326 IPR027417 -
Apr4g2646 886 SUPERFAMILY L domain-like 489 856 - -
Apr4g2646 886 Pfam Rx N-terminal domain 5 89 IPR041118 -
Apr4g2646 886 Coils Coil 104 124 - -
Apr4g2646 886 PRINTS Disease resistance protein signature 185 200 - -
Apr4g2646 886 PRINTS Disease resistance protein signature 272 286 - -
Apr4g2646 886 PRINTS Disease resistance protein signature 367 381 - -
Apr4g2646 886 PRINTS Disease resistance protein signature 625 641 - -
Apr4g2646 886 Gene3D Ribonuclease Inhibitor 572 883 IPR032675 -
Apr4g2646 886 Gene3D - 5 103 - -
Apr4g2646 886 CDD RX-CC_like 12 121 IPR038005 -
Apr4g2646 886 PANTHER - 51 877 - -
Apr4g2646 886 PANTHER DISEASE RESISTANCE PROTEIN RP 51 877 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2646 Apr-Chr4 35208181 35210841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2646 172 507 WRKY Transcription Factor Family AT5G45050 23.824 1.08e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2646 - - aprc:113862567 1231.08