Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2645 ATGACAAGTGTTCAGTTTCATTGGAGAGTTTTAAGTTTACTGATTTCAGTTTCCTATTTGCTGACTTGCTTGGGAAACAATGACATTCCTGTTCAGTTGAATGATGATGTTCTTGGTCTGATTGTGTTTAAATCAGACCTTCATGACCCTTCTTATCTTGCTTCGTGGAATGAAGATGATGTCAACCCATGTTCATGGCAGTTTGTGCAATGCAATCCTGAGAGTGGAAGAGTCACAGAGGTCTCATTGGATGGCTTAGGATTATCTGGGAAGATTGGAAGAGGTCTTGAGAAGTTGCAGCATCTAACGGTATTGTCTCTTTCTCACAACAACTTGAGTGGGAGTATTAGTCCATCACTTACTCTTTCCAATAGTCTTGAAAGGTTGAACCTTAGTCACAATGGTCTTTCTGGTCCCATACCTACTTCTTTTGTAAATTTGAGTTCAATAAGATTTCTTGATCTTTCAGAGAATTCATTCTCAGGACCAATCCCTGACAACTTGTTTGAGAGATGGTTTTCGCTTCATCACCTTTCTCTAGCTTGGAACATGTTTGAAGGACAAATTCCGGGGTCATTGTCTAGATGTTCCTCTTTGAATAGCCTTAATCTTTCCAATAATCGTTTCAGTGGTAATGTGGACTTCACTGGGATTTGGTCACTGAGCAGGCTTAGGACTTTGGATCTATCCAACAATGCCTTATCTGGCACTCTACCTAGTGGAATTTCATCCATACATAACTTGAAAGAGATTTTATTACAAGGTAACCAGTTTTCAGGTCCATTACCTACTGATATTGGGCTCTGCCTGCATCTGAGTAGGTTTGATTTCAGTGATAATCAGCTCAGTGGAGAACTACCAGAGTCACTTGGGAGGCTGAATTCTTTGAGCTATTTCAAGGCATCAAATAATCTTTTCACGAATGAGTTTCCTCAGTGGATTGGTAACATGACCAGTCTTGAACAACTAGAGCTCTCAAACAATCAGTTCACTGGAAGCATCCCGCACTCAATAGGGGAATTGAGATCACTATCTTATTTTAGCATTTCAAATAACAAGCTTGTTGGAAATATTCCATCATCATTGGGTTCCTGCACAAAGTTATCTGTGATCAGGCTCAGAGGTAATGGTTTCAATGGAACCATTCCCGAGGGCTTGTTTGGCCAAGGATTGGAGGAAATAGACTTATCCCATAATGGTCTGATGGGTACAATTCCTGCAGCCTCAAGCAGACTCTTGGAAACACTCACCAATTTGGATCTTTCAGATAACCATCTCCAAGGGAATATCCCTGCAGAAATGGGTCTTCTTTCAAAACTAAGATATTTGAACCTGTCTTGGAATGATCTTCATTCGCAGATGCCTCCAGAATTTGGTCTCCTTCAGAACCTAACAGTTTTGGATCTTCGTTACAGTGCCTTGTATGGTTCAGTTCCAGCAGATATATGTGATTCAGGCAATTTAGCTGTCCTTCAACTGGATGGAAATTCACTGAAGGGATCTATTCCAGATGAGATTGGGAATTGCACATCTCTTTACTTGCTGAGTTTGTCTCACAATAATTTGACTGGTTCAATTCCAAAGTCCATGTCAAAGTTAAACAAACTCAAAATTCTCAAACTGGAACTCAATGAGTTAATTGGAGAGATACCAATGGAGCTTGGAATGCTTCAAAGTCTTCTTGCTGTGAACATATCATATAACAGGCTCACGGGCAGGCTTCCTGCAGGTAGCATATTTCAGAACTTGGACAAAAGTTCCTTGGAAGGAAATCTTGGTCTTTGCTCACCCTTGTTGAATGGTCCATGTAAGATGAATGTCCCCAAGCCACTAGTGCTAGACCCAAATGCCTATAACAACCAAATAGGTCCCCAAAGACAAAGAAATGAATCATCTGTGCCTGGCCAAATTCATCGCCACAGGTTCCTTAGTGTATCTGCTATTGTAGCAATATCTGCATCCTTTGTCATTGTATTAGGAGTAATTGCTGTTAGCTTGCTTAATGTTTCTGTAAGGAGAAAGCTATCATTTGTGGATAATGCTTTGGAAAGCATGTGCTCAAGCTCTTCAAGATCTGGAAGCCCAGCCACAGGAAAGCTTGTTCTGTTGGATTCACAGTCCTCATCTGATTGGATCAGCAATCCTGAGTCCTTGCTCAACAAGGCATCTGAGATTGGGGAAGGAGTCTTTGGAACTGTATATAAGGTACCATTGGGATCACAAGGTAGAGTGGTGGCAATCAAAAAGCTTATTACCTCGAACATAATCCAATATCCAGAAGACTTCGATAGGGAAGTCAGAATCCTAGGAAAAGCAAGGCACCCAAATCTAATAGCATTGAAAGGATACTATTGGACTCCTCAATTACAGCTTTTAGTAACTGAGTATGCACCAAATGGTAGCCTGCAAACCAAGCTACATGAAAGACTTCCTTCTAGTCCTCCACTTTCTTGGGCTATTAGATTTAAAATTTTGCTTGGAACAGCAAAGGGTCTTGCCCACTTGCACCATTCTTTCCGTCCTCCAATCATTCATTACAACATAAAGCCAAGTAACATTTTGCTTGATGAAAATTGCAACCCGAAAATCTCAGATTTTGGGTTAGCTCGGCTTCTGACAAAGCTAGACAGGCATGTTATGAGCAACAGGTTTCAGAGTGCATTAGGATATGTAGCACCAGAATTAGCATGCCAAAGCTTAAGGGTCAATGAGAAATGTGATGTGTACGGTTTTGGAGTGATGATCCTTGAGCTGGTGACAGGTAGAAGGCCAGTGGAGTATGGAGAAGACAATGTGCTGATACTGAATGACCATGTAAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGATTGTGTGGATCAAAGCATGAGTGAGTACCCTGAGGATGAAGTGTTGCCAGTTCTGAAGCTAGCAATGGTATGCACTTCTCAAATACCTTCTAGCAGACCTACTATGGCTGAAGTGGTGCAAATACTGCAAGTCATTAAAACTCCAGTTCCTCAAAGGATGGAAGTGTTTTGA 3021 0.4131 MTSVQFHWRVLSLLISVSYLLTCLGNNDIPVQLNDDVLGLIVFKSDLHDPSYLASWNEDDVNPCSWQFVQCNPESGRVTEVSLDGLGLSGKIGRGLEKLQHLTVLSLSHNNLSGSISPSLTLSNSLERLNLSHNGLSGPIPTSFVNLSSIRFLDLSENSFSGPIPDNLFERWFSLHHLSLAWNMFEGQIPGSLSRCSSLNSLNLSNNRFSGNVDFTGIWSLSRLRTLDLSNNALSGTLPSGISSIHNLKEILLQGNQFSGPLPTDIGLCLHLSRFDFSDNQLSGELPESLGRLNSLSYFKASNNLFTNEFPQWIGNMTSLEQLELSNNQFTGSIPHSIGELRSLSYFSISNNKLVGNIPSSLGSCTKLSVIRLRGNGFNGTIPEGLFGQGLEEIDLSHNGLMGTIPAASSRLLETLTNLDLSDNHLQGNIPAEMGLLSKLRYLNLSWNDLHSQMPPEFGLLQNLTVLDLRYSALYGSVPADICDSGNLAVLQLDGNSLKGSIPDEIGNCTSLYLLSLSHNNLTGSIPKSMSKLNKLKILKLELNELIGEIPMELGMLQSLLAVNISYNRLTGRLPAGSIFQNLDKSSLEGNLGLCSPLLNGPCKMNVPKPLVLDPNAYNNQIGPQRQRNESSVPGQIHRHRFLSVSAIVAISASFVIVLGVIAVSLLNVSVRRKLSFVDNALESMCSSSSRSGSPATGKLVLLDSQSSSDWISNPESLLNKASEIGEGVFGTVYKVPLGSQGRVVAIKKLITSNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEYAPNGSLQTKLHERLPSSPPLSWAIRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENCNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLDCVDQSMSEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2645 1006 ProSiteProfiles Leucine-rich repeat profile. 415 437 IPR001611 GO:0005515
Apr4g2645 1006 ProSiteProfiles Leucine-rich repeat profile. 101 123 IPR001611 GO:0005515
Apr4g2645 1006 Gene3D Transferase(Phosphotransferase) domain 1 801 1003 - -
Apr4g2645 1006 CDD STKc_IRAK 725 993 - -
Apr4g2645 1006 SUPERFAMILY L domain-like 316 588 - -
Apr4g2645 1006 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 1004 - -
Apr4g2645 1006 SUPERFAMILY L domain-like 50 383 - -
Apr4g2645 1006 PANTHER BNAA09G02190D PROTEIN 10 1004 - -
Apr4g2645 1006 PRINTS Leucine-rich repeat signature 224 237 - -
Apr4g2645 1006 PRINTS Leucine-rich repeat signature 413 426 - -
Apr4g2645 1006 Gene3D Ribonuclease Inhibitor 341 609 IPR032675 -
Apr4g2645 1006 ProSitePatterns Protein kinases ATP-binding region signature. 725 749 IPR017441 GO:0005524
Apr4g2645 1006 Gene3D Phosphorylase Kinase; domain 1 719 800 - -
Apr4g2645 1006 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Apr4g2645 1006 SMART LRR_typ_2 221 245 IPR003591 -
Apr4g2645 1006 SMART LRR_typ_2 461 485 IPR003591 -
Apr4g2645 1006 SMART LRR_typ_2 437 460 IPR003591 -
Apr4g2645 1006 SMART LRR_typ_2 147 171 IPR003591 -
Apr4g2645 1006 SMART LRR_typ_2 99 124 IPR003591 -
Apr4g2645 1006 SMART LRR_typ_2 317 341 IPR003591 -
Apr4g2645 1006 SUPERFAMILY Protein kinase-like (PK-like) 722 1000 IPR011009 -
Apr4g2645 1006 Pfam Protein kinase domain 721 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2645 1006 Gene3D Ribonuclease Inhibitor 217 269 IPR032675 -
Apr4g2645 1006 Gene3D Ribonuclease Inhibitor 149 216 IPR032675 -
Apr4g2645 1006 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Apr4g2645 1006 Gene3D Ribonuclease Inhibitor 270 340 IPR032675 -
Apr4g2645 1006 ProSiteProfiles Protein kinase domain profile. 719 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2645 1006 Pfam Leucine rich repeat 390 450 IPR001611 GO:0005515
Apr4g2645 1006 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Apr4g2645 1006 Pfam Leucine rich repeat 302 354 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2645 Apr-Chr4 35191579 35194690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2645 11 1003 Receptor kinase-like Gene Family AT3G28040 64.143 0.0 1249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Apr4g2645 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2645 - - gmx:100795810 1753.8