Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2638 ATGACTCAGGCGGTGGAGGTACTGAACCGGTATGGGACGGATCTGGTGGGGGAAGCGAGGGGTTCGGATTCAGAGTGTTTGGCGGGATTTGAGTGTTTTCTGAACATTGTGAGGGCACTGGGAATGGGATCGTGCATTTCGGAGGTTGGTGGTAGCGGTAGTTCCCCCCCTCTTCTACCTTATTCGCCTGAGTCCAATTTGGATGGTGGGAAGAGGAGGAGGTTGAGGGGTTCCTCATCCTTTGATTGTAAGGTGCCTGGGAGAATGTTTTTGAATGGGTCAAGCGAGGTTGCATCCTTGTATTGCAAGCAAGGTAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTCAAAGGGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGAGTTGCAAAGAGAGTTAGGGATTCTTTCCCTTTAAAGCTTAATGCCCAATGGGATTTGCATCATAAGAATAAAGATGGACTCAGCGATCATAGCAGTGCTGCCGGAAGTTATAAATCTGACGGGCCTGGCTATAGACTGGTTGATGAGAAACCTAGTCCCACTGATCATGAACTTGATGAAACAGATACAATTTTGACACTAAAAGATTCTTTTTTGAAGGCTTGTAAGAATATGGATAAAGAACTGAAACTACATCCTGATATTGACTGCTTTTGCAGTGGCACTACAGCAGTTACCTTGGTCAAGCAAGGGCTGGACCTTGTTATTGGAAATGTTGGAGACTCGAGAGCTGTGTTGGGTACCCGAGATCATGATGAGTCTCTCATTGCTGTTCAATTGACCATTGATCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATCAAGCATCGTAAAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGATGTGGCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGACTTGCTATGGCACGGGCATTTGGAGATTTTTGCCTCAAGGACTTTGGATTAATTTCTGTTCCGGATGTCTCTTATCACCGCCTTACTGAGAAGGATGAATTTGTTGTGTTAGCAACAGATGGGATTTGGGATGTTCTATCAAATGAAGAAGTCGTGGACATTGTTGCATCTGCTTCACAGTCTACTGCTGCTCGAACACTGGTTGAATCAGCTGTTCAAGCATGGAGGACAAAATTTCCTTTTTGTAAGGTTGATGATTGTGCTGCAGTTTGCCTCTTCTTTGATTCAAATTCAGACTTCAAGTCAGCAGATAACAAAGATGAGTTGACACCAGAGGCATTTATTGACCAATCTGAGCAGTTATCTCAACGTCATGAAAAGGGAATTGGAATGGAAGCTGAAAAACAGTAG 1362 0.4435 MTQAVEVLNRYGTDLVGEARGSDSECLAGFECFLNIVRALGMGSCISEVGGSGSSPPLLPYSPESNLDGGKRRRLRGSSSFDCKVPGRMFLNGSSEVASLYCKQGRKGINQDAMLVWENFCQREDTIFCGVFDGHGPYGHRVAKRVRDSFPLKLNAQWDLHHKNKDGLSDHSSAAGSYKSDGPGYRLVDEKPSPTDHELDETDTILTLKDSFLKACKNMDKELKLHPDIDCFCSGTTAVTLVKQGLDLVIGNVGDSRAVLGTRDHDESLIAVQLTIDLKPNLPREEERIKHRKGRVFSLQNEPDVARVWLPNSDFPGLAMARAFGDFCLKDFGLISVPDVSYHRLTEKDEFVVLATDGIWDVLSNEEVVDIVASASQSTAARTLVESAVQAWRTKFPFCKVDDCAAVCLFFDSNSDFKSADNKDELTPEAFIDQSEQLSQRHEKGIGMEAEKQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2638 453 CDD PP2Cc 97 411 IPR001932 -
Apr4g2638 453 Gene3D - 93 420 IPR036457 -
Apr4g2638 453 PANTHER ALPHABET, ISOFORM E-RELATED 42 417 - -
Apr4g2638 453 MobiDBLite consensus disorder prediction 165 200 - -
Apr4g2638 453 SMART PP2C_4 91 409 IPR001932 -
Apr4g2638 453 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 417 - -
Apr4g2638 453 SUPERFAMILY PP2C-like 95 413 IPR036457 -
Apr4g2638 453 Pfam Protein phosphatase 2C 191 389 IPR001932 -
Apr4g2638 453 ProSiteProfiles PPM-type phosphatase domain profile. 97 411 IPR001932 -
Apr4g2638 453 MobiDBLite consensus disorder prediction 184 200 - -
Apr4g2638 453 MobiDBLite consensus disorder prediction 51 73 - -
Apr4g2638 453 MobiDBLite consensus disorder prediction 431 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2638 Apr-Chr4 35144099 35148943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2638 70 415 PP2C-type Phosphatase Gene Family AT1G16220 59.615 8.30e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2638 - - gmx:100810538 825.854