Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2625 ATGCTGTATTTGGAAACGCCAGTTGGAGTTGGCTTCTCTTACTCAACTGACACTTCCTTTTATGAAGGTGTGAATGACAAGATTACAGCCAGGGATAATCTGGTTTTCTTGCAAAACTGGTTTATAAAGTTCCCAGAATATAGAAACAGAAGTTTGTTCATTGTCGGAGAAAGCTATGCTGGTCATTATGTTCCTCAACTGGCTGAGCTTATGCTCCAATTCAACAAAAAGGAAATGTTGTTCAATTTAAAAGGCATTGCTCTTGGTAATCCAGTTCTAGAATTTGCAACAGATTTCAATTCGAGAGCTGAGTTCTTCTGGTCTCATGGATTAATTTCAGATCTAACATACAAAATGTTCACTTCTGTTTGCAACTATTCAAGATATGTGAGGGAATACTATAATGGTGCTGTTTCTCCTATCTGTTCAAGTGTAATGAGCCAAGTTAGTACGGAAACCAGTAGATTTGTTGACAAGTATGATGTTACCCTTGATGTTTGTATATCTTCTGTGTTTTCACAAACCAAAGTCCTCAACCCCCAGCAGCAAGTTACTGAAACGATAGATGTATGTGTGGAAGATGAAACAGTTAATTATCTTAACAGAAAAGATGTGCAGTCAGCTTTGCATGCACGTCTGATTGGGGTGCAAAGATGGTCTGCTTGCAGCAATGTCCTGGATTATGAGCTGCGTGACTTGGAGATACCAACAATCACGGTTGTGGGGAAGCTAGTCAAGGCAGGAATACCAGTTTTGGTCTACAGTGGTGATCAAGATTCAGTTATTCCACTAACTGGAAGCAGAACATTAGTACGTAAATTGGCAAAAGAACTAAGATTGAATACCACTGTTCCTTACAGGGTTTGGTTTGAGGGGCAGCAGGTGGGTGGGTGGACTCAAGTATATGGTAACATCCTTTCATTTGCTACCATTAGGGGAGCATCACATGAAGCCCCTTTTTCACAGCCTCAAAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGCCCAACCTCTACCACTAGCATTTTGA 1032 0.406 MLYLETPVGVGFSYSTDTSFYEGVNDKITARDNLVFLQNWFIKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEMLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDLTYKMFTSVCNYSRYVREYYNGAVSPICSSVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNPQQQVTETIDVCVEDETVNYLNRKDVQSALHARLIGVQRWSACSNVLDYELRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRTLVRKLAKELRLNTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPQRSLVLFKSFLEAQPLPLAF* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2625 343 Pfam Serine carboxypeptidase 1 335 IPR001563 GO:0004185|GO:0006508
Apr4g2625 343 ProSitePatterns Serine carboxypeptidases, histidine active site. 306 323 IPR033124 GO:0004185
Apr4g2625 343 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 341 IPR001563 GO:0004185|GO:0006508
Apr4g2625 343 PANTHER CARBOXYPEPTIDASE 1 341 - -
Apr4g2625 343 PRINTS Carboxypeptidase C serine protease (S10) family signature 4 14 IPR001563 GO:0004185|GO:0006508
Apr4g2625 343 PRINTS Carboxypeptidase C serine protease (S10) family signature 40 65 IPR001563 GO:0004185|GO:0006508
Apr4g2625 343 PRINTS Carboxypeptidase C serine protease (S10) family signature 306 319 IPR001563 GO:0004185|GO:0006508
Apr4g2625 343 ProSitePatterns Serine carboxypeptidases, serine active site. 54 61 IPR018202 GO:0004185
Apr4g2625 343 Gene3D alpha/beta hydrolase 1 339 IPR029058 -
Apr4g2625 343 SUPERFAMILY alpha/beta-Hydrolases 1 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2625 Apr-Chr4 34997823 35000172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2625 199 339 Calmodulin-binding Proteins AT2G22960 28.369 2.12e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2625 K16297 - gmx:100805130 646.351