Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2624 ATGTTTCGGAAAAGGCACACTTCTTCTCTTGCAAAGGAATTGTTGGCATTCCAGCCACTTTTTCTTCTGTTCTTGTTCAGCTTGCACCATAACACTGTGCAATGTCAAGGAAGGTTGAGTAAACATGTATCTTCAGAGCCTCCCTCACCACCTCGGCCATCACCGCCATCATCAGGATCCAAAGATGACCCTACAAAGATCATTGTGAGCGTGGTTTTAGGAGCAGTCACTGGACTAGTGTGTTCTGTTCTCTTTGCACTTGTGGTTCGTTGTGTTGTTCAGTATCTGAACCGCACACCAATCCTCAAGGGTCCTGTCATATTCTCCCCCAAAATTGCCCCCAAGACACTCCAATCGGCTTTGGCAAAAGAAAACCATTTGCTTGGTTCGAGTTCTAATGGAAAATACTACAAAACTGTTCTTGACAATGGACTCACAATTGCAGTCAAAAGGCTAACACCCTTTGAGAGCAATTCCCCAGAGGCTAAGAGAAAATCAGTGAAGAGGCAGATACAGACAGAGTTAGAGCTTCTTGCTAGCCTTAGACATAGGAACTTGATGAGTTTGAGGGCATATGTTCGTGAACCTGATGGGTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTAGCAGATGTGATGAATAGAGTTAGGGAGAATGAGTTGCCTTTTGGTTGGGAAGTTAGGCTAAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTTTGCACTACAACTTGAAGCCCACAAATGTGATGTTGGATGCTGAGTTTGAACCAAGATTGGCAGATTTTGGATTGGCTAAACTCCTTCCCAACTTGAATAGAGGAACATCTGTCAACACCCCTCCTGAATGTTTCCATAGTTGCAGCAGGTACACTGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTATTTTGCTAACGGGTAAGGACCCTACAGATCCATTTTTTGGAGAAGCAGCCAGTGGAGGAAGCTTGGGATGTTGGCTGAGGCATTTGCAGCAAGCTGGTGAGGCACGCGAAGCTCTAGATAAGAGCATGTTAGGGGGAGAATTGGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCCTATCTGATATGCCTGCAGATAGGCCTTCCAGTGATGAACTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA 1215 0.4494 MFRKRHTSSLAKELLAFQPLFLLFLFSLHHNTVQCQGRLSKHVSSEPPSPPRPSPPSSGSKDDPTKIIVSVVLGAVTGLVCSVLFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSSNGKYYKTVLDNGLTIAVKRLTPFESNSPEAKRKSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVMNRVRENELPFGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADFGLAKLLPNLNRGTSVNTPPECFHSCSRYTDKSDIFSFGMILGILLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEAREALDKSMLGGELEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2624 404 ProSiteProfiles Protein kinase domain profile. 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2624 404 CDD STKc_IRAK 128 401 - -
Apr4g2624 404 Gene3D Transferase(Phosphotransferase) domain 1 206 403 - -
Apr4g2624 404 Pfam Protein kinase domain 124 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2624 404 Gene3D Phosphorylase Kinase; domain 1 111 205 - -
Apr4g2624 404 MobiDBLite consensus disorder prediction 39 63 - -
Apr4g2624 404 SUPERFAMILY Protein kinase-like (PK-like) 125 398 IPR011009 -
Apr4g2624 404 PANTHER - 11 404 - -
Apr4g2624 404 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 11 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2624 Apr-Chr4 34992855 34995670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2624 68 401 Receptor kinase-like Gene Family AT2G31880 34.930 5.59e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Apr4g2624 Pkinase 5.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2624 - - gmx:102664273 694.886