Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2609 ATGGGGCAATTAGCATGTGCACAGGGTAAAAGGCCATATCCACGCATCATTCATCGAGATATTAAGTCATCAAACATCCTTGATCACAACTTTGAAGCTCAAGTTTCAGACTTTGGGCTTGCAAAATTGGCATTGGACTACATAGTAACTTTGTCCAGGTACATGGCACCAGAATATGCTACAAGTGGGAAACTAACTGAAAAGTCTGATGTATATTCCTTTGGGGTTTTGCCTTTGGAGCTAATTACTGGTCGTAAGCCTGTAGATGCATCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGGCCTCTGTTGACCGAAGCACTTGATAACGAGGACTTTGAAATTTTGGTAGATCCAAGACTGGGAGAGAATTATAATAGAAATGAGATGTTTCGGATGATTGAGGCTGCTGCAGCCTGCGTACGCCACTCATCAGTAAAGAGGCCGCGGATGAGTCAGGTCGTGAGAGCTTTAGATTCCTTAGACTAG 498 0.4438 MGQLACAQGKRPYPRIIHRDIKSSNILDHNFEAQVSDFGLAKLALDYIVTLSRYMAPEYATSGKLTEKSDVYSFGVLPLELITGRKPVDASQPIGDESLVEWARPLLTEALDNEDFEILVDPRLGENYNRNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLD* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2609 165 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 13 165 - -
Apr4g2609 165 SUPERFAMILY Protein kinase-like (PK-like) 14 159 IPR011009 -
Apr4g2609 165 Gene3D Transferase(Phosphotransferase) domain 1 5 165 - -
Apr4g2609 165 SMART tyrkin_6 1 161 IPR020635 GO:0004713|GO:0006468
Apr4g2609 165 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2609 165 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 13 165 - -
Apr4g2609 165 Pfam Protein tyrosine and serine/threonine kinase 15 161 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2609 Apr-Chr4 34828150 34831106 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2609 13 165 Trihelix Transcription Factor Family AT5G38560 71.166 3.46e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr4g2609 PK_Tyr_Ser-Thr 9.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2609 - - aprc:113862561 329.331