Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2607 ATGGCTTCAACCCTTTCTCCAAATGCTTCTCCTTCTGCTGTGCCTCCAGCATCTGGTGGTGTTCTATCACTGCCTCCTTCTTCATCTTCTCTAATAAATTCCCCCACTCCACCATCACCACCCAATGTATCTCAGCCTAATCAAACATCCAATTCCCCTGCCCCTTCATCTCCTTCTGACCCTTCAGCTCCACCTCCTTCTCCTCCACAGGCAGTGCCAGAAACTCCTCCTCCTTCTCCATCCCTCTCTCCTCCCCCATCATCCACACCACCACCAACTTTGCCCCCTCCTTCACCACCAGCTTCTCCACCACCAGCATCTCCTACACCTCCAGTTGCAACATCACCACCAGCACCAGCAACCACTGCCCCTCCTCCAACTGAGACTACACCTTCCCTTCCAACTTTGTCCCCACCACCTCCAGCAACTGGTTCCCCTCCTCCTCAATCTTCAGAGGCACCTCCCACAACAATTCCACCTCCCTCTCAACCGACTTCACCGTCTCCTCCTCCTCCAGCCAATGTTCCAAGGCCACCATCCACCAGTTCTCCTCCTCCACACAAGGAGAATCCACCTAAAATAACTCCTTCACCTCCTTCACATGCATCCCCTCCATCAGTTTCTCAATCCCCTCCATCTCCTCCTTCCATTGATGCTCCCCCTCCATCCACATTGCCATCAATTCCTCCTTCAGTCCCTTCAGGCTCTTCACCTCCGGTTTCTTTGCCCGACCCCCCAACTAATAAAACAACTGCCGGAGGTCCAGGTGGTCCAAGTGTATCATTACCGTCTCTTCCAACTGAGAAACCCACTGCTAGGCCAACTAATGATGGCAGTAATATGGCCTCAAACATCAAACCTTCACATTCAGGAGGGTTAAGTACTGGAGGATCTGTGGCTATTGGCATTGTAGTTGGCTTTATTGTCCTCAGTCTTCTTGTTATGGCTGTGTGGTTTGTACAGAAAAGAAAGAAGAAGGTAGCTGGATCAAGAGGTGGTTACGCTGCACCTTCTCCATTTACCTCATCCCACAATTCAGGTACCTTATTTTTGAGGCCACAGTCTCCAGCAAACTTTTTAGGTAGTGGCTCTGGTAGTGATTTTGTATATTCACCATCTGAACCAGGTGGAGTAAGTAGTTCACGATCATGGTTCACATATGAAGAACTTATCCAAGCTACAAATGGTTTTTCAGCACAAAATTTATTGGGAGAAGGCGGATTTGGTTGTGTCTATAAAGGTTTGCTCATGGATGGAAGAGAAGTAGCTGTTAAACAGCTCAAAATTGGTGGTGGGCAAGGGGAACGTGAATTCAGGGCAGAAGTTGAGATTATTAGCCGTGTACATCATCGTCATCTGGTTTCCTTGGTTGGTTACTGTATATCTGATCATCAAAGATTGCTTGTGTATGACTATCTTCCCAACAATACTCTTCATTACCATCTCCATGGTGAAAACAGACCGGTTCTGGATTGGCCAACCAGAGTCAAGGTTGCAGCTGGTTCGGCTCGTGGAATTGCTTACCTACATGAAGACTGCCATCCACGCATCATTCATCGAGATATCAAGTCATCAAACATCCTTCTAGATCACAACTTTGAAGCTCAAGTTTCAGACTTTGGGCTTGCAAAATTGGCGCTCGATTCAAATACTCATGTGACTACACGCGTAATGGGAACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGGAAACTAACTGAAAAGTCTGATGTATATTCCTTTGGGGTTGTGCTTTTGGAGCTAATTACTGGTCGTAAGCCTGTAGATGCATCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGGCCTTTGTTGACCGAAGCACTTGATAAAGAGGACTTTGAAATTTTGGTGGATCCAAGACTGGGAGAGAATTATAATAGAAGTGAGATGTTTCGGATGATTGAGGCTGCTGCAGCCTGCGTGCGCCACTCATCAGTAAAGAGGCCGCGGATGAGTCAGGTAGTGAGAGCTTTAGATTCCTTAGACGAGTTTACGGATCTCAATAATGGAATGAAACCGGGGCAGAGCTCGGTGTTTGATTCTGCACAGCAATCTGCACAAATAAGAATGTTTAGAAGGATGGCTTTTGGGAGCCAAGATAGTTCCAGTTTCTTTAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCAGGAATCAACTACTGTGTTTTCCCAAAACAAATCTGCCACTTGGAATGTTTGA 2238 0.4714 MASTLSPNASPSAVPPASGGVLSLPPSSSSLINSPTPPSPPNVSQPNQTSNSPAPSSPSDPSAPPPSPPQAVPETPPPSPSLSPPPSSTPPPTLPPPSPPASPPPASPTPPVATSPPAPATTAPPPTETTPSLPTLSPPPPATGSPPPQSSEAPPTTIPPPSQPTSPSPPPPANVPRPPSTSSPPPHKENPPKITPSPPSHASPPSVSQSPPSPPSIDAPPPSTLPSIPPSVPSGSSPPVSLPDPPTNKTTAGGPGGPSVSLPSLPTEKPTARPTNDGSNMASNIKPSHSGGLSTGGSVAIGIVVGFIVLSLLVMAVWFVQKRKKKVAGSRGGYAAPSPFTSSHNSGTLFLRPQSPANFLGSGSGSDFVYSPSEPGGVSSSRSWFTYEELIQATNGFSAQNLLGEGGFGCVYKGLLMDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYLPNNTLHYHLHGENRPVLDWPTRVKVAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDHNFEAQVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEALDKEDFEILVDPRLGENYNRSEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFTDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSSFFNESQSSWRSRDQESTTVFSQNKSATWNV* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2607 745 SUPERFAMILY Protein kinase-like (PK-like) 375 670 IPR011009 -
Apr4g2607 745 MobiDBLite consensus disorder prediction 264 292 - -
Apr4g2607 745 MobiDBLite consensus disorder prediction 57 245 - -
Apr4g2607 745 SMART serkin_6 397 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2607 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Apr4g2607 745 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 121 721 - -
Apr4g2607 745 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
Apr4g2607 745 Pfam Protein tyrosine and serine/threonine kinase 400 669 IPR001245 GO:0004672|GO:0006468
Apr4g2607 745 Gene3D Phosphorylase Kinase; domain 1 374 472 - -
Apr4g2607 745 CDD STKc_IRAK 403 673 - -
Apr4g2607 745 MobiDBLite consensus disorder prediction 1 292 - -
Apr4g2607 745 PRINTS Proline rich extensin signature 4 16 - -
Apr4g2607 745 PRINTS Proline rich extensin signature 26 47 - -
Apr4g2607 745 PRINTS Proline rich extensin signature 53 69 - -
Apr4g2607 745 PRINTS Proline rich extensin signature 74 91 - -
Apr4g2607 745 PRINTS Proline rich extensin signature 92 117 - -
Apr4g2607 745 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 121 721 - -
Apr4g2607 745 Gene3D Transferase(Phosphotransferase) domain 1 473 689 - -
Apr4g2607 745 ProSiteProfiles Protein kinase domain profile. 397 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2607 Apr-Chr4 34800675 34807664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2607 142 714 Trihelix Transcription Factor Family AT1G70460 50.417 2.40e-168 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr4g2607 PK_Tyr_Ser-Thr 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2607 - - gmx:100784873 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2607 4 34800675 34807664 Apr4g2607 4 34800675 34807664 ECH