Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2587 ATGCTAGTGTACTACATTAACATCTTGTTCTTGCGCATGACATTCCATCAATCTGTGCTTCAAAAAAACAAGGAAAAAAAAAAAAAAAACCCTCAATACTATTACTCTTGCCACATTGAGTGGGGCCATCTAACCATTTTCCCTCCCTATATATACTCAACTAACTCTTATTTCCTTCATCTCCATAGAAACTATTATTTATCCCTCAGTGTTATCTCCCCAAAGCCTTGCAATCTTTTGTTCATAAATTTCTACACCATGCAAGCTAGGGAGATTACAGGACTCAATTATTTACTCCCTTCAGACACTCCTCCTTATCCAAGTCACTACACCATGATTCAGAACAACATCCCCACATTTCAAATCCACAAACTCTCGAACCAATTCTATGGTTTCCAACACCAAAACCCTCCCCAACTACTTGCAGAATTCAGCCCTCAGTCCTCATGCATAAGCAGCAACTCAACTTCTGATGAAGCAGATGAGCAACAACAAAGCCTCATCAATGAGAGGAAGCACAGAAGGATGATATCAAACCGTGAATCTGCACGCCGGTCACGGATGAGGAAGCAAAAGCATCTTGATGAACTATGGTCACAGGTTGTTTGGCTGAGGAATGAAAATCACCAACTAATAGACAAGCTGAACCATGTATCAGAATCACATGACAGAGTTGCTCAAGAAAATGTTCAACTGAGAGAGGAAGCTTCAGAACTTCGCCAAATGCTATGTGACATGCAACTACACAGTCCATGCCCCCCCTTGAGCCCCATTGAAGATGTTCCCACCACTTCTCCCTATGTCAAATCTGATTCCTCAAACCAATCATCATTCACAAGCTCTATGGAACTTCTTGGTTAA 861 0.4135 MLVYYINILFLRMTFHQSVLQKNKEKKKKNPQYYYSCHIEWGHLTIFPPYIYSTNSYFLHLHRNYYLSLSVISPKPCNLLFINFYTMQAREITGLNYLLPSDTPPYPSHYTMIQNNIPTFQIHKLSNQFYGFQHQNPPQLLAEFSPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDRVAQENVQLREEASELRQMLCDMQLHSPCPPLSPIEDVPTTSPYVKSDSSNQSSFTSSMELLG* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2587 286 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 232 IPR004827 GO:0003700|GO:0006355
Apr4g2587 286 Coils Coil 222 242 - -
Apr4g2587 286 Pfam bZIP transcription factor 171 221 IPR004827 GO:0003700|GO:0006355
Apr4g2587 286 SMART brlzneu 167 231 IPR004827 GO:0003700|GO:0006355
Apr4g2587 286 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 174 189 IPR004827 GO:0003700|GO:0006355
Apr4g2587 286 CDD bZIP_plant_GBF1 172 223 IPR045314 GO:0003700|GO:0006355
Apr4g2587 286 PANTHER BZIP TRANSCRIPTION FACTOR 87 278 - -
Apr4g2587 286 MobiDBLite consensus disorder prediction 148 163 - -
Apr4g2587 286 MobiDBLite consensus disorder prediction 254 286 - -
Apr4g2587 286 MobiDBLite consensus disorder prediction 148 168 - -
Apr4g2587 286 Gene3D - 169 224 - -
Apr4g2587 286 MobiDBLite consensus disorder prediction 263 286 - -
Apr4g2587 286 SUPERFAMILY Leucine zipper domain 171 221 IPR046347 GO:0003700|GO:0006355
Apr4g2587 286 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 87 278 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2587 Apr-Chr4 34639344 34644867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2587 129 251 bZIP Transcription Factor Family AT3G30530 66.667 2.92e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr4g2587 bZIP_1 5.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2587 - - aprc:113863596 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2587 4 34639344 34644867 Apr4g2587 4 34639344 34644867 ECH
Apr6g0312 6 3327679 3328341 Apr4g2587 4 34639344 34644867 PCT