Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2584 ATGACGATTGGTAGTTTTGCACCAAAGGGAGAGAAGAAGAAATCACGGAAGAACAAGGCAGTGATCAATGAGAATGCACCCTTGTTGCCAAAAAGTCAGGATCAGGAGAGTGATGCAGGGTTTGATGATTTCAATGGAGCTTCATTCTCTGGAGCTGTTTTTAACTTGTCCACCACAATCATTGGTGCTGGAATCATGGCCTTGCCTGCAACCTTGAAACAGTTGGGGATGATACCTGGCCTCATTGCCATCATCATCATGGCTTTGTTGACAGAGAAGTCAATTGAGCTTTTGATTAGGTTTACCCGGGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGAGATTCTTTTGGCAAATTTGGAAAAGCTCTGGCGCAGATATGTGTTATAGTCAATAATATCGGGGTGCTGGTTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAAGTGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACTGGGAGAACATTTATAGTCCTTTTTACAACACTTGTTATATTTGCACCCCTGGCTAGCTTTAAGCGAATCGATTCATTGAGATTCACATCAGCCCTTTCAGTAGCACTAGCAGTTGTTTTTCTAGTCATTGCAGTGGGAATCTCAATTGTCAAGATTATAAGTGGAGGCATTGAAATGCCCAGACTCTTCCCGGTCACTACTGATGTGACATCATTCCTTCAATTATTCACCGTTGTTCCTGTGTTTGTCACTGCCTATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCCTCACAAATGCGAGGAGTTGTACGCACCGCCCTTCTTCTATGCTCATCAGTCTATGTAACGATAAGCTTCTTTGGGTTCCTCCTATTTGGAGAAGGAACTCTTGATGATGTGCTTGCCAATTTCGATGCCGATTTAGGAATTCCTTTTGGTTCTGTACTCAACGATGCTGTTCGTCTAAGCTATGCTGCACACCTAATGCTTGTATTTCCAGTGGTCTTCTATCCATTGCGGTTAAATATAGATGGTCTCCTCTTCTCTTCATCAAGGCCTCTGGTTCTGGATAACTTCAGATTTGCATCACTCACTATTTCCCTTATTGGTGTTATATTCCTGGGAGCAAATTTTATTCCTAGCATTTGGGATGCTTTCCAGTTCACAGGAGCAACCGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATAGCAACTAAAGCAGACAAGATTTTGTCTGTTGTTATGATAGTCCTGGCTGTCTTCTCAAACATTGTGGCAATATACAGTGATGCCTATGCCTTGATCAAGCAGAACAAATCTAAACGCGAATGA 1398 0.4285 MTIGSFAPKGEKKKSRKNKAVINENAPLLPKSQDQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLIAIIIMALLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKFGKALAQICVIVNNIGVLVVYMIIIGDVLSGTSSSGDHHYGILEGWFGVHWWTGRTFIVLFTTLVIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGISIVKIISGGIEMPRLFPVTTDVTSFLQLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVRTALLLCSSVYVTISFFGFLLFGEGTLDDVLANFDADLGIPFGSVLNDAVRLSYAAHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLDNFRFASLTISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKADKILSVVMIVLAVFSNIVAIYSDAYALIKQNKSKRE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2584 465 PANTHER AMINO ACID TRANSPORTER 7 460 - -
Apr4g2584 465 Pfam Transmembrane amino acid transporter protein 47 451 IPR013057 -
Apr4g2584 465 MobiDBLite consensus disorder prediction 1 37 - -
Apr4g2584 465 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2584 Apr-Chr4 34611019 34615004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2584 3 464 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.182 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2584 K14207 - gmx:100796345 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2584 4 34611019 34615004 Apr4g2584 4 34611019 34615004 ECH
Apr6g0308 6 3264636 3268471 Apr4g2584 4 34611019 34615004 PCT