Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2553 ATGGCATCACCGACACCATTGTTGAAAGATGAACTTGACATCGTGATACCCACTATCAGGAACCTTGATTTCTTGGAGATGTGGAGGCCATTCTTTCAGCCTTACCATCTCATAATTGTTCAAGATGGCGACCCTTCAAAGACCATCAAGGTCCCTGATGGCTTTGACTATGAACTCTACAACCGCAATGACATCAACAGGATTCTGGGTCCTAAGGCCAATTGCATCTCCTTTAAGGATTCTGCATGTCGTTGCTTTGGCTACATGGTCTCTAAGAAGAAGTACATCTACACCATTGATGATGATTGCTTTGTGGCCAATGATCCATCTGGCAAGAAGATTAATGCACTGGAGCAGCATATCAAAAACCTTCTCTGCCCATCCACTCCATTCTTTTTCAACACCCTCTATGAACCTTTCAGAGAAGGTGCAGATTTTGTCCGCGGTTACCCCTTCAGTCTCCGTGAAGGTGTACCAACCGCAGTTTCTCATGGTCTTTGGCTCAACATCCCAGACTATGATGCTCCTACTCAGCTTGTGAAGCCTCTTGAGAGGAACACCAGGTATGTGGATGCTGTTTTGACCATACCAAAGGGCACTTTGTTTCCCATGTGTGGAATGAACTTGGCATTTGATCGTGATCTCATCGGACCAGCAATGTACTTTGGTCTCATGGGTGATGGTCAGCCTATCGGACGCTACGACGACATGTGGGCTGGCTGGTGCTGCAAGGTAATCTGTGATCACTTGGGATTGGGAATCAAAACTGGTCTTCCCTACATCTATCACAGCAAGGCTAGTAATCCTTTTGTTAACCTGAGGAAAGAATACAAAGGCATATTCTGGCAAGAAGACATTATCCCATTCTTCCAGAGTATTGTTATTCCAAAAGAAGCTACCACTGTTCAGAAGTGCTACATTGAGCTTGCCAAGCAAGTCAAGGAAAAGCTTAGCAAGGTTGATCCTTACTTTGACAAGTTGGCAGATGCCATGGTGACTTGGATTGAAGCTTGGGATGAGCTTAACCCTGCTGGAGCTTCACTTGCCAATGGCAAAAAGGCATAA 1065 0.4535 MASPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINRILGPKANCISFKDSACRCFGYMVSKKKYIYTIDDDCFVANDPSGKKINALEQHIKNLLCPSTPFFFNTLYEPFREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVLTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSIVIPKEATTVQKCYIELAKQVKEKLSKVDPYFDKLADAMVTWIEAWDELNPAGASLANGKKA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2553 354 PIRSF UPTG 2 346 IPR004901 GO:0016866|GO:0071669
Apr4g2553 354 SUPERFAMILY Nucleotide-diphospho-sugar transferases 12 221 IPR029044 -
Apr4g2553 354 Pfam Reversibly glycosylated polypeptide 8 342 IPR037595 -
Apr4g2553 354 PANTHER UDP-ARABINOSE MUTASE 3 346 IPR037595 -
Apr4g2553 354 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 3 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2553 Apr-Chr4 34333836 34336255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2553 K13379 - gmx:100784882 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0279 6 2855475 2858061 Apr4g2553 4 34333836 34336255 PCT