Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2551 ATGGCCTTCTCTCTGCTGCCAAAATCAACTCCTTGCATTTTGTTCTTGTTTCTACTCTCTTGTGTTTGCTTCACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATCACAATCAAATGGGATGTTATAAGCTGGACTCCTGATGGATATGTTGCTGTTGTTACAATGAACAACTTCCAACAATATCGCCATATCCCAGCACCTGGCTGGTCGCTGGGATGGACATGGGCAAAAAAGGAGGTAATATGGACCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATGTTCCACATTGCTGTATGAAAACTCCAACAATTGTAGATTTGCTTCCTGGAACACCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGCGTGCTCAGCTCATGGGTGCAGGATCCAACCACTGCAGTTGCATCATTTCAAGTAAGCGTTGGAAGAGCTGGAACCACAAACAGAACTGTCAAACTCCCCAAAAATTTCACCTTGAAAGCACCAGGACCTGGTTATACTTGTGGACCAGCTAAAATTGTGAGGCCTACTCAATTCATTCAACCCGACAAAAGAAGAGTGACCCAAGCACTGATGACGTGGAATGTGACATGCACATATTCACAATTTCTTGCTCAGAAAACTCCCTCTTGCTGTGTCTCACTTTCATCTTTCTATAACGACACTATTGTGCCTTGCCCAACTTGTGCATGTGGCTGCCAAAGTAACTCGTCTCAGTCAGGGGGCTGTGTACATCCAGATACGCCACATTTGGCACAGGTTGTTTCTGGCTCTGGGAAGAATAATTTTTCACCTTTGGTTCAATGCACTAGTCATATGTGCCCAATCCGAATCCACTGGCACGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTTACTATTAATAATTTTAATTACAGGATGAATTATTCTGAGTGGAACTTGGTTGTTCAACACCCAAACTTGGATAATCTGACTCAACTCTTCAGTTTTAACTACAAGTCATTGACTCCTTATGGTTCCATAAATGATACAGCAATGCTATGGGGAATTAAGTTCTATAATGATTTCCTCAACCAAGCTGGCCCTAATGGCAATGTGCAATCAGAGCTACTCTTCCGAAAGGATGCAGCAACTTTTACTTTTGATAAGGGTTGGGCTTTTCCTCGAAGGATCTACTTCAATGGTGACAACTGTGTGATGCCACCACCTGATGCTTACCCGTGGTTACCTAATGCTGGTTTGCGACAAGAGGTTTCCTTGTTTGCTTTGGTGATGGCTTCTTTGGTAGCGTTGCTATTTTATGCATACACATGA 1347 0.4313 MAFSLLPKSTPCILFLFLLSCVCFTSTDAYDPLDPNGNITIKWDVISWTPDGYVAVVTMNNFQQYRHIPAPGWSLGWTWAKKEVIWTMMGGQTTEQGDCSKFKGNVPHCCMKTPTIVDLLPGTPYNQQIANCCKGGVLSSWVQDPTTAVASFQVSVGRAGTTNRTVKLPKNFTLKAPGPGYTCGPAKIVRPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVPCPTCACGCQSNSSQSGGCVHPDTPHLAQVVSGSGKNNFSPLVQCTSHMCPIRIHWHVKLNYKEYWRVKVTINNFNYRMNYSEWNLVVQHPNLDNLTQLFSFNYKSLTPYGSINDTAMLWGIKFYNDFLNQAGPNGNVQSELLFRKDAATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGLRQEVSLFALVMASLVALLFYAYT* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2551 448 PANTHER COBRA-LIKE PROTEIN 7 447 - -
Apr4g2551 448 PIRSF COBRA 2 448 IPR006918 GO:0010215|GO:0031225
Apr4g2551 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Apr4g2551 448 PANTHER PROTEIN COBRA 7 447 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2551 Apr-Chr4 34321097 34324786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2551 13 443 COBRA Gene Family AT3G02210 75.289 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2551 - - gmx:100783820 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2551 4 34321097 34324786 Apr4g2551 4 34321097 34324786 ECH
Apr4g2551 4 34321097 34324786 Apr6g0276 6 2831618 2835483 ECH
Apr6g0277 6 2835781 2838396 Apr4g2551 4 34321097 34324786 PCT
Apr4g2551 4 34321097 34324786 Apr6g0276 6 2831618 2835483 PCT