Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2545 ATGTTCCTCCCTTGTTTGGACTTTCGCCGTTCCAAGCACACGAATTCATCTGAGAGACAGTATACGACGGGAATAGAAGAGCTGTGCCGTCATTTTTCTCTGGAGGATCTTAGGAAATCAACCAACAATTTTGATGAAAACAGATTACTTGGACGATTTAGTAGCGTATACATAGGTTGTCTCCAACATAATGATGTTTTGGATTACAGAGTCGCAATAAAGCGAAGATGCCACGAGTTCAAGAATGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCTAATTTGGTGTCTCTTATTGGATTTTGCGACGAGCAATATGAAAAGATTATTGTGTACGAGTACATGTCCAATGGATCTCTAGATAAACACCTACACGAAGGGAATAGGGAACCACTGTCGTGGAAGAAAAGACTTGAGATTTGCATAGGAGCGGCGCGTGGAGTACACTACCTTCACACAGGTGCCAAGCGCACCATCTTCCACCGTGACATCAAACCTAGCAACATTCTCTTGGATCACAACATGGAGCCAAAACTCGCAGATTTAGGCCTTTCGTTACAGGGACCACATTTTATGTCCAAGCCTAAACCAATTCAAGTTGACGCCATTATTGGTACATACCGCTATATGGCCTTTGAGTATGCCTTGTACGGTACCATCACAGAAAAATGTGATGTTTACTCATTCGGTATGGTTCTACTAGACGTTGTACGTGGAAGTGAAAATATAATGCAAAACAAGATTTTGGGAACGGACCAAGCCTGTTGA 768 0.4284 MFLPCLDFRRSKHTNSSERQYTTGIEELCRHFSLEDLRKSTNNFDENRLLGRFSSVYIGCLQHNDVLDYRVAIKRRCHEFKNEIELLCQLRHPNLVSLIGFCDEQYEKIIVYEYMSNGSLDKHLHEGNREPLSWKKRLEICIGAARGVHYLHTGAKRTIFHRDIKPSNILLDHNMEPKLADLGLSLQGPHFMSKPKPIQVDAIIGTYRYMAFEYALYGTITEKCDVYSFGMVLLDVVRGSENIMQNKILGTDQAC* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2545 255 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 243 - -
Apr4g2545 255 ProSiteProfiles Protein kinase domain profile. 42 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2545 255 PANTHER OS07G0166700 PROTEIN 15 243 IPR045272 GO:0004714|GO:0006468
Apr4g2545 255 SUPERFAMILY Protein kinase-like (PK-like) 18 241 IPR011009 -
Apr4g2545 255 SMART serkin_6 44 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2545 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Apr4g2545 255 Pfam Protein tyrosine and serine/threonine kinase 51 241 IPR001245 GO:0004672|GO:0006468
Apr4g2545 255 Gene3D Transferase(Phosphotransferase) domain 1 115 251 - -
Apr4g2545 255 Gene3D Phosphorylase Kinase; domain 1 6 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2545 Apr-Chr4 34289958 34292605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2545 2 237 Receptor kinase-like Gene Family AT3G51550 45.238 3.02e-61 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr4g2545 PK_Tyr_Ser-Thr 8.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2545 - - gmx:100305392 308.531