Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2544 ATGGTTCTCAAATGCTTGGGCTTTTACCGTTCCAAGCACGCGAACTCATCTAATAGACAGTATCCGACAGTGATAGAAGAGTTGTGCCATCAATTTTCTCTGGCGGATCTTAGGAAATCAACCAACAACTTCGATGGTAACAGATTAATTGGACACGGAGCATTTGGTAAAGTATATAAAGGTTGTCTCCAACACAATGAAGCTTCTGATTACACAGTCGCATTAAAGCGATTGTATATTAATTGCGGACAAGGATGCAGAGTGTTCAAGAATGAAATTGAGTTGCTCTGTCAGCTTCTTCACCCTAATTTGGTGTCTCTTATAGGATTCTGCGACCACGAAGATGAGAAGATCATTGTGTACGAGTACATGTCCAATGGATCTCTGGATGAACACCTATGTGATGGGAATAGGGAACCACTGTCATGGAAGAAAAGGCTTGAGATCTGCATAGGAGCCGCGCGTGGAGTACACTACCTTCACACAGGTGCCAAGCGCACCATCTTCCACCGTGACATCAAACCTAGCAACATTCTTTTGGATGATGAAATGAAGCCTAGACTCTCAGCTTTCGGCGTTTCCATACAAGGACCACATTTTATGTCCAAGCCTAAACCAATTCAAGTAGATAGCATTGCTGGTGCAAATCGCTACATGGCCTTTGAGTATGCCTTGAACGGTACTATCACAGAAAAATGTGATGTTTACTCATTTGGTATGGTCCTACTAGACGTTGTACATGGAAGTGAAAATATAAGATTTTGGGAACGGACCCAGCCTGTTGAGGAGAATATTGATGCTACTATTGAAGGGGAAATAGCACCAGAGTGTTGGGAAGTTTTTATAGATATCACCCAAAGATGCTTGCAGTTCGAACCAGATGAGCGACCAACAATGGGTGAAGTAGAGGTGCAACTTGAACTTGCTCTATCATTGCAGGAACAAGCAGATATCAGAAACACCAATGGCGATTATACTTTATTTTCCACCACCATTATTAACCTGGGAGTGGAATTGGAATCCGACACCGTTGATAACATATACAGTGACACAGAAGACAGTGATTCTGAAGACACATCCTAA 1083 0.4247 MVLKCLGFYRSKHANSSNRQYPTVIEELCHQFSLADLRKSTNNFDGNRLIGHGAFGKVYKGCLQHNEASDYTVALKRLYINCGQGCRVFKNEIELLCQLLHPNLVSLIGFCDHEDEKIIVYEYMSNGSLDEHLCDGNREPLSWKKRLEICIGAARGVHYLHTGAKRTIFHRDIKPSNILLDDEMKPRLSAFGVSIQGPHFMSKPKPIQVDSIAGANRYMAFEYALNGTITEKCDVYSFGMVLLDVVHGSENIRFWERTQPVEENIDATIEGEIAPECWEVFIDITQRCLQFEPDERPTMGEVEVQLELALSLQEQADIRNTNGDYTLFSTTIINLGVELESDTVDNIYSDTEDSDSEDTS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2544 360 Gene3D Transferase(Phosphotransferase) domain 1 124 331 - -
Apr4g2544 360 SMART serkin_6 44 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2544 360 PANTHER OS07G0166700 PROTEIN 15 329 IPR045272 GO:0004714|GO:0006468
Apr4g2544 360 SUPERFAMILY Protein kinase-like (PK-like) 18 310 IPR011009 -
Apr4g2544 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Apr4g2544 360 Gene3D Phosphorylase Kinase; domain 1 6 123 - -
Apr4g2544 360 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Apr4g2544 360 Pfam Protein tyrosine and serine/threonine kinase 48 305 IPR001245 GO:0004672|GO:0006468
Apr4g2544 360 ProSiteProfiles Protein kinase domain profile. 44 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2544 360 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2544 Apr-Chr4 34286455 34289926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2544 11 333 Receptor kinase-like Gene Family AT1G30570 40.237 2.62e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr4g2544 PK_Tyr_Ser-Thr 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2544 - - gmx:100305395 451.44