Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2542 ATGGCTCAAACAGTGAAGGTAATAGAGCAATGTCAAATTAGTCCTCCACCAGGTTCGGTTCCTTCAACATCTATTCCACTTACTTTCCTTGACCTTCCATGGCTTTGTTGCCCCCCAATTAAACGTATTTTTCTCTATGAGTTCCCTTATTCCACCCAATACTTCTTCCAAACTTTCCTTCCAACTCTCAAGCACTCTCTTTCTCTCACTCTCCAACACTTCTTCCCTTTCTCTGCCAATCTAGTGTTCCCTCCGAAGCCAAACAAACCTCATATCCTCTACTCCCATGATGACTGTATCTCCTTCACCGTGGTAGAGTCCACAGCAGATTTCACCAAACTTGTGTCTGATTCCCCAAGAGATGTTAAGGACTTGCATCCTTTTGTTCCTTTGTTGCCTTCATCACGTACCTTAGAAGATGGCACGTTTTTGTTCCCTCTCATGGCCATTCAGGTGACTGTTATGTCCAATTCCGCCTTTAGCATATGCATAACTTTCAGCCACGTGGTGGCAGATGGGAGGGCATTTCATCACTTCATGAAATTTTGGGCCTCTATTTGTAAGTCAAAAGGAGACTTGGCTTTCCTTGAAGGCTCTCTTTCTCTACCCTTGCACAACAGAAATATCATTGACGACCCAATAAGCCTTAAGCCCATTTTCTCAGAAGAATTGTGGAATTTGTCGCTCCAAAACCTGAACTCCAAGGGCCTCATACATGACGTTCCTAGTGACATGGTGCGTCATATGATTGTGTTGAGCCATGACCATATTGAGAAACTCAAGAGATGGGTCTCTGTCAGATGCAAAAGCCATGATCCAGCAACACTACACATAACAACATTTGTGGTAACATGTTCTTTGATTTGGGTTTGTAAGGTGAAATCAGAAGAGATTAAAGATGGCATAATACTTCCCAATAATGATGAGTCCTACGTCTTAACCTTTGTGGCAGATTGTCGTAACCGTCCACAACTTTCAACTCAGTTGGAATACTTTGGAAATTGTTTGGTTAGTGGCAATGTTGTGTTGAAAAGGAGCACGCTTGTGGCAGGAAATGGTATTTTGGAGGCGGCCATTGCTATTGGTAGCAAAGTTAGATATATGCAATGTGAAATTTTTGAAGGGGCTGAAACATTGATGTCAAATTTAACAGAATTTGACAAGTTGGGGCAGCATGTGACAGTAATTGCAGGCTCACCTAAGTTGGAAGTGTATGAGACTGACTTTGGATGGGGAAAGCCCAAGAGGAGTGAAGTAGTTAATGTAGAAATTTCAGGAACAATCTCTTTTTCTGACTGTAGGGACGAAGAAGGTAAAATTGAAGTTGGGTTAGCACTTCAAAAGATTCAAATGAAGAAATTTTGTACCATATTGCAAGAGCAGCTAAGAGAAATTGCAATTCTTTGA 1407 0.4172 MAQTVKVIEQCQISPPPGSVPSTSIPLTFLDLPWLCCPPIKRIFLYEFPYSTQYFFQTFLPTLKHSLSLTLQHFFPFSANLVFPPKPNKPHILYSHDDCISFTVVESTADFTKLVSDSPRDVKDLHPFVPLLPSSRTLEDGTFLFPLMAIQVTVMSNSAFSICITFSHVVADGRAFHHFMKFWASICKSKGDLAFLEGSLSLPLHNRNIIDDPISLKPIFSEELWNLSLQNLNSKGLIHDVPSDMVRHMIVLSHDHIEKLKRWVSVRCKSHDPATLHITTFVVTCSLIWVCKVKSEEIKDGIILPNNDESYVLTFVADCRNRPQLSTQLEYFGNCLVSGNVVLKRSTLVAGNGILEAAIAIGSKVRYMQCEIFEGAETLMSNLTEFDKLGQHVTVIAGSPKLEVYETDFGWGKPKRSEVVNVEISGTISFSDCRDEEGKIEVGLALQKIQMKKFCTILQEQLREIAIL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2542 468 Gene3D - 241 465 IPR023213 -
Apr4g2542 468 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 3 467 - -
Apr4g2542 468 PANTHER - 3 467 - -
Apr4g2542 468 Gene3D - 4 236 IPR023213 -
Apr4g2542 468 Pfam Transferase family 7 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2542 Apr-Chr4 34278589 34280293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2542 21 460 Monolignol Biosynthesis Gene Families AT5G48930 23.355 7.74e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2542 - - gmx:100782335 712.22