Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g2541 | ATGGTGTTTCAGTTCTATTTTTCCACCAGGTGCTGCTTCAATTACTGCATACAAATGGGCCCACGCAGCATGCGAATTGCAACAGAAACCACCGTCTTTCTGTTGTTGTTGTTATTGTGTCTCTCTTACGTTTCCACAGCACAGGATATTTACCACCCCGCTGAGCATTTTACCATCTTGTGTGGCTCCTCCACCAATCTCTATGCAGATGGTGGTCGGAACTGGACTGGGGACAACAACATGAAACTCCTCTCAGAAAACAATGGCTCTGTTTCTGTACCCGCACCCACATCACCCACCATACAGGGCCCATACACCTCAGCTCGTCTCTCTAGGTCCCAATTCACCTACTCGTTCCCTGTCACCCAAGGCCAAAAGTTCCTTCGCCTCTTCTTCTACTCCACTTCATACCAAAACTTCGATCGCCATGCAGCCTCTTTCTCAGTCAAATCAGGCAAATTCACCCTCCTCAAAGATTTCAACGCTTCGCTTCATGCTGATGCTGAAGACAACGACAACGATATCCTGTTCAGAGAGTACTGCATCAACGTCCAAGATGGTGAGAGACTCAACATAACCTTCATTCCAAGCACCAAAGATAATTCCTACGCTTTCATTAATGGAATCGAGATCGTGTCGATGCCTGATTTTCTCTACTATACAAGACCCAACGACGACAGTGGATTCCCGCAACTTGTTGGGCACAACAACCAATACCAAATCGTAAACAACTACGCTCTGGAGAACAAGTACAGGTTAAGAGTTGGAGGACGAGAAATACCACCCTTTAACGACACAGGCATGTTCAGGACTTGGCAACCTGATGACAAATACCTAACTACAAAAGGTGACAAATTTTACAGTGCTGATATTGAACGTACAAGGAATCTCAGCTTCACTAAGGCCACTCCTGAATACGACGCACCGGACGAAGTGTACCGAACCGTACGGAATATGGGACCGAATCCCACTTCTAACATGGAATTCAACCTCACTTGGCAGCTTCCCGTTGATTTGGGCTTCTCTTACTTGCTACGGTTACACTTTTGCCAGCTTGACTGGAATGTTGACAGTCCCGGTGACGTGAAATTCTACATTTTCGTAGCGGATCAACTGGCTACCGATGACGCCGACGTTCTTTTGTGGACCAAAAACAAGGGTGTGCCCGTCGTTAAAGATTACGTTGTTTCCATCCCACCCAATAACAATAATTCAAACCTTTCACTCAAACTGCATCCTCACCCTACAAGCCTCATCAAGGACGCCACTCTAAACGCAATTGAACTCTTCAAAATCAACGATTCAACGGGTAGTCTCGCTGAACCCAACCCGTACGCTCCTCCACAAACCTCTCAGATTCCCTCGCCACTCTCAAACAGGGAAACAAGACCCAACAGAAGAATCCTTGCTGACGCCGTCGCTGCTGCTGTTTCCTGTGTCGTTTTGCTATCATGTATCGTCGCTCTCTTCTTCATCAAACGCCGCAGGAACGTCGTCGGCGACAAGGGTTTCTCCAAGAGAAAACACGGAACTTCTCGCGGCAGTGCCTCGTCTTCCCTACCCACCAACCTCTGCCGCCACTTCTCAATCGCGGAAATCAGAGCCGCCACCAACAACTTCGACGAACTCTTCGTCGTTGGCGTGGGAGGATTCGGCAACGTGTACAAAGGCTACATCGACAACGGTTCAACACGTGTCGCGATCAAAAGGCTGAAACCTGGTTCTCAGCAAGGCGCGCACGAGTTCATGAACGAGATCGAAATGCTCTCTCAACTTCGCCACCTCCATTTAGTTTCCCTGATCGGTTACTGCTATGAAAGTAACGAGATGATCCTGGTTTACGATTTCATGGATCGAGGAACCCTCCGTGACCATCTCTACGACACCGATAACCCTTCCCTGTCGTGGAAGCAAAGGCTTAAGATCTGCATAGGTGCTGCACGTGGGCTGCACTATCTGCATACAGGTGCGAAGCACATGATCATTCACCGTGACGTGAAGAGCACGAATATCCTATTGGACGAAAAATGGGTAGCGAAGGTTTCAGACTTTGGGCTTTCGAGAATTGGGCCCACGGGAACTTCAATGACCCACGTGAGCACTCAGGTAAAAGGCAGCGTGGGATATTTGGATCCAGAGTATTACAAACGACAGCGTTTAACGGAAAAATCTGACGTGTACTCGTTTGGAGTGGTGCTTTTGGAGGTATTGTCTGGGAGACAGCCTTTGCTAAGAACGGTGGAGAAGCATCGAATTTCACTTGTTGATTGGGCGAAGCGTTGCTTTCATTTGGGGACTATGAGAGACATTGTGGATCCAACGCTGAAGGGTGAGATTGGAGGCGAGTGTTTCCGCAAGTTCGGTGAGATTGCTCTCAACTGTTTGCTTGAGGATGGGTCTCAACGCCCTTCCATGAACGACGTCGTTGGGGGGCTCGAGTTTGTTCTTCAGCTTGCCGAATATAATGCTGTTAAGGGAGTGGTGGAGCTTGCCGCCAATGTTTATGAAGATAGTGATGCCACGTTTAGCAGTAGCCAAAGTAGTACACATGTTTCCGATTATAGTAAGAGCACTGGATTTAGCACGACAAGTGATGGAGATGGTAGCATTGGCAGTAAGGAATCCCACAGGTTGATCTCCGGAAATGTTTTCTCCGAGATTATGGAACCAAAGGGACGATGA | 2682 | 0.4821 | MVFQFYFSTRCCFNYCIQMGPRSMRIATETTVFLLLLLLCLSYVSTAQDIYHPAEHFTILCGSSTNLYADGGRNWTGDNNMKLLSENNGSVSVPAPTSPTIQGPYTSARLSRSQFTYSFPVTQGQKFLRLFFYSTSYQNFDRHAASFSVKSGKFTLLKDFNASLHADAEDNDNDILFREYCINVQDGERLNITFIPSTKDNSYAFINGIEIVSMPDFLYYTRPNDDSGFPQLVGHNNQYQIVNNYALENKYRLRVGGREIPPFNDTGMFRTWQPDDKYLTTKGDKFYSADIERTRNLSFTKATPEYDAPDEVYRTVRNMGPNPTSNMEFNLTWQLPVDLGFSYLLRLHFCQLDWNVDSPGDVKFYIFVADQLATDDADVLLWTKNKGVPVVKDYVVSIPPNNNNSNLSLKLHPHPTSLIKDATLNAIELFKINDSTGSLAEPNPYAPPQTSQIPSPLSNRETRPNRRILADAVAAAVSCVVLLSCIVALFFIKRRRNVVGDKGFSKRKHGTSRGSASSSLPTNLCRHFSIAEIRAATNNFDELFVVGVGGFGNVYKGYIDNGSTRVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGTLRDHLYDTDNPSLSWKQRLKICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGTSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLSGRQPLLRTVEKHRISLVDWAKRCFHLGTMRDIVDPTLKGEIGGECFRKFGEIALNCLLEDGSQRPSMNDVVGGLEFVLQLAEYNAVKGVVELAANVYEDSDATFSSSQSSTHVSDYSKSTGFSTTSDGDGSIGSKESHRLISGNVFSEIMEPKGR* | 894 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g2541 | 893 | MobiDBLite | consensus disorder prediction | 842 | 874 | - | - | |
Apr4g2541 | 893 | ProSitePatterns | Protein kinases ATP-binding region signature. | 546 | 569 | IPR017441 | GO:0005524 | |
Apr4g2541 | 893 | Gene3D | Phosphorylase Kinase; domain 1 | 501 | 616 | - | - | |
Apr4g2541 | 893 | Gene3D | Transferase(Phosphotransferase) domain 1 | 617 | 832 | - | - | |
Apr4g2541 | 893 | MobiDBLite | consensus disorder prediction | 440 | 461 | - | - | |
Apr4g2541 | 893 | PANTHER | CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN | 49 | 859 | - | - | |
Apr4g2541 | 893 | Gene3D | - | 56 | 214 | - | - | |
Apr4g2541 | 893 | Gene3D | - | 247 | 433 | - | - | |
Apr4g2541 | 893 | CDD | STKc_IRAK | 555 | 809 | - | - | |
Apr4g2541 | 893 | Pfam | Protein tyrosine and serine/threonine kinase | 546 | 809 | IPR001245 | GO:0004672|GO:0006468 | |
Apr4g2541 | 893 | SMART | serkin_6 | 540 | 815 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2541 | 893 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 661 | 673 | IPR008271 | GO:0004672|GO:0006468 | |
Apr4g2541 | 893 | PANTHER | OS07G0166700 PROTEIN | 49 | 859 | IPR045272 | GO:0004714|GO:0006468 | |
Apr4g2541 | 893 | ProSiteProfiles | Protein kinase domain profile. | 540 | 815 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2541 | 893 | Pfam | Malectin-like domain | 61 | 432 | IPR024788 | - | |
Apr4g2541 | 893 | SUPERFAMILY | Protein kinase-like (PK-like) | 515 | 814 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g2541 | Apr-Chr4 | 34267711 | 34271179 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g2541 | 51 | 893 | Receptor kinase-like Gene Family | AT3G51550 | 48.581 | 0.0 | 749 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Apr4g2541 | Malectin_like | 2.9e-42 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g2541 | - | - | gmx:113000103 | 1097.03 |