Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2541 ATGGTGTTTCAGTTCTATTTTTCCACCAGGTGCTGCTTCAATTACTGCATACAAATGGGCCCACGCAGCATGCGAATTGCAACAGAAACCACCGTCTTTCTGTTGTTGTTGTTATTGTGTCTCTCTTACGTTTCCACAGCACAGGATATTTACCACCCCGCTGAGCATTTTACCATCTTGTGTGGCTCCTCCACCAATCTCTATGCAGATGGTGGTCGGAACTGGACTGGGGACAACAACATGAAACTCCTCTCAGAAAACAATGGCTCTGTTTCTGTACCCGCACCCACATCACCCACCATACAGGGCCCATACACCTCAGCTCGTCTCTCTAGGTCCCAATTCACCTACTCGTTCCCTGTCACCCAAGGCCAAAAGTTCCTTCGCCTCTTCTTCTACTCCACTTCATACCAAAACTTCGATCGCCATGCAGCCTCTTTCTCAGTCAAATCAGGCAAATTCACCCTCCTCAAAGATTTCAACGCTTCGCTTCATGCTGATGCTGAAGACAACGACAACGATATCCTGTTCAGAGAGTACTGCATCAACGTCCAAGATGGTGAGAGACTCAACATAACCTTCATTCCAAGCACCAAAGATAATTCCTACGCTTTCATTAATGGAATCGAGATCGTGTCGATGCCTGATTTTCTCTACTATACAAGACCCAACGACGACAGTGGATTCCCGCAACTTGTTGGGCACAACAACCAATACCAAATCGTAAACAACTACGCTCTGGAGAACAAGTACAGGTTAAGAGTTGGAGGACGAGAAATACCACCCTTTAACGACACAGGCATGTTCAGGACTTGGCAACCTGATGACAAATACCTAACTACAAAAGGTGACAAATTTTACAGTGCTGATATTGAACGTACAAGGAATCTCAGCTTCACTAAGGCCACTCCTGAATACGACGCACCGGACGAAGTGTACCGAACCGTACGGAATATGGGACCGAATCCCACTTCTAACATGGAATTCAACCTCACTTGGCAGCTTCCCGTTGATTTGGGCTTCTCTTACTTGCTACGGTTACACTTTTGCCAGCTTGACTGGAATGTTGACAGTCCCGGTGACGTGAAATTCTACATTTTCGTAGCGGATCAACTGGCTACCGATGACGCCGACGTTCTTTTGTGGACCAAAAACAAGGGTGTGCCCGTCGTTAAAGATTACGTTGTTTCCATCCCACCCAATAACAATAATTCAAACCTTTCACTCAAACTGCATCCTCACCCTACAAGCCTCATCAAGGACGCCACTCTAAACGCAATTGAACTCTTCAAAATCAACGATTCAACGGGTAGTCTCGCTGAACCCAACCCGTACGCTCCTCCACAAACCTCTCAGATTCCCTCGCCACTCTCAAACAGGGAAACAAGACCCAACAGAAGAATCCTTGCTGACGCCGTCGCTGCTGCTGTTTCCTGTGTCGTTTTGCTATCATGTATCGTCGCTCTCTTCTTCATCAAACGCCGCAGGAACGTCGTCGGCGACAAGGGTTTCTCCAAGAGAAAACACGGAACTTCTCGCGGCAGTGCCTCGTCTTCCCTACCCACCAACCTCTGCCGCCACTTCTCAATCGCGGAAATCAGAGCCGCCACCAACAACTTCGACGAACTCTTCGTCGTTGGCGTGGGAGGATTCGGCAACGTGTACAAAGGCTACATCGACAACGGTTCAACACGTGTCGCGATCAAAAGGCTGAAACCTGGTTCTCAGCAAGGCGCGCACGAGTTCATGAACGAGATCGAAATGCTCTCTCAACTTCGCCACCTCCATTTAGTTTCCCTGATCGGTTACTGCTATGAAAGTAACGAGATGATCCTGGTTTACGATTTCATGGATCGAGGAACCCTCCGTGACCATCTCTACGACACCGATAACCCTTCCCTGTCGTGGAAGCAAAGGCTTAAGATCTGCATAGGTGCTGCACGTGGGCTGCACTATCTGCATACAGGTGCGAAGCACATGATCATTCACCGTGACGTGAAGAGCACGAATATCCTATTGGACGAAAAATGGGTAGCGAAGGTTTCAGACTTTGGGCTTTCGAGAATTGGGCCCACGGGAACTTCAATGACCCACGTGAGCACTCAGGTAAAAGGCAGCGTGGGATATTTGGATCCAGAGTATTACAAACGACAGCGTTTAACGGAAAAATCTGACGTGTACTCGTTTGGAGTGGTGCTTTTGGAGGTATTGTCTGGGAGACAGCCTTTGCTAAGAACGGTGGAGAAGCATCGAATTTCACTTGTTGATTGGGCGAAGCGTTGCTTTCATTTGGGGACTATGAGAGACATTGTGGATCCAACGCTGAAGGGTGAGATTGGAGGCGAGTGTTTCCGCAAGTTCGGTGAGATTGCTCTCAACTGTTTGCTTGAGGATGGGTCTCAACGCCCTTCCATGAACGACGTCGTTGGGGGGCTCGAGTTTGTTCTTCAGCTTGCCGAATATAATGCTGTTAAGGGAGTGGTGGAGCTTGCCGCCAATGTTTATGAAGATAGTGATGCCACGTTTAGCAGTAGCCAAAGTAGTACACATGTTTCCGATTATAGTAAGAGCACTGGATTTAGCACGACAAGTGATGGAGATGGTAGCATTGGCAGTAAGGAATCCCACAGGTTGATCTCCGGAAATGTTTTCTCCGAGATTATGGAACCAAAGGGACGATGA 2682 0.4821 MVFQFYFSTRCCFNYCIQMGPRSMRIATETTVFLLLLLLCLSYVSTAQDIYHPAEHFTILCGSSTNLYADGGRNWTGDNNMKLLSENNGSVSVPAPTSPTIQGPYTSARLSRSQFTYSFPVTQGQKFLRLFFYSTSYQNFDRHAASFSVKSGKFTLLKDFNASLHADAEDNDNDILFREYCINVQDGERLNITFIPSTKDNSYAFINGIEIVSMPDFLYYTRPNDDSGFPQLVGHNNQYQIVNNYALENKYRLRVGGREIPPFNDTGMFRTWQPDDKYLTTKGDKFYSADIERTRNLSFTKATPEYDAPDEVYRTVRNMGPNPTSNMEFNLTWQLPVDLGFSYLLRLHFCQLDWNVDSPGDVKFYIFVADQLATDDADVLLWTKNKGVPVVKDYVVSIPPNNNNSNLSLKLHPHPTSLIKDATLNAIELFKINDSTGSLAEPNPYAPPQTSQIPSPLSNRETRPNRRILADAVAAAVSCVVLLSCIVALFFIKRRRNVVGDKGFSKRKHGTSRGSASSSLPTNLCRHFSIAEIRAATNNFDELFVVGVGGFGNVYKGYIDNGSTRVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGTLRDHLYDTDNPSLSWKQRLKICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGTSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLSGRQPLLRTVEKHRISLVDWAKRCFHLGTMRDIVDPTLKGEIGGECFRKFGEIALNCLLEDGSQRPSMNDVVGGLEFVLQLAEYNAVKGVVELAANVYEDSDATFSSSQSSTHVSDYSKSTGFSTTSDGDGSIGSKESHRLISGNVFSEIMEPKGR* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2541 893 MobiDBLite consensus disorder prediction 842 874 - -
Apr4g2541 893 ProSitePatterns Protein kinases ATP-binding region signature. 546 569 IPR017441 GO:0005524
Apr4g2541 893 Gene3D Phosphorylase Kinase; domain 1 501 616 - -
Apr4g2541 893 Gene3D Transferase(Phosphotransferase) domain 1 617 832 - -
Apr4g2541 893 MobiDBLite consensus disorder prediction 440 461 - -
Apr4g2541 893 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 49 859 - -
Apr4g2541 893 Gene3D - 56 214 - -
Apr4g2541 893 Gene3D - 247 433 - -
Apr4g2541 893 CDD STKc_IRAK 555 809 - -
Apr4g2541 893 Pfam Protein tyrosine and serine/threonine kinase 546 809 IPR001245 GO:0004672|GO:0006468
Apr4g2541 893 SMART serkin_6 540 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2541 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Apr4g2541 893 PANTHER OS07G0166700 PROTEIN 49 859 IPR045272 GO:0004714|GO:0006468
Apr4g2541 893 ProSiteProfiles Protein kinase domain profile. 540 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2541 893 Pfam Malectin-like domain 61 432 IPR024788 -
Apr4g2541 893 SUPERFAMILY Protein kinase-like (PK-like) 515 814 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2541 Apr-Chr4 34267711 34271179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2541 51 893 Receptor kinase-like Gene Family AT3G51550 48.581 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr4g2541 Malectin_like 2.9e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2541 - - gmx:113000103 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2541 4 34267711 34271179 Apr4g2541 4 34267711 34271179 ECH