Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2540 ATGGTGAAGTTCACAATAAACAAAATTCCCAATGAAATCAGCCTCAGGATTTTTGTGGTTCTATTTCATCTGTTGTTCTTTCTGCAGGTTAACTCATACTACGAGCCCACTGAAAATTTTGCTGTCAACTGCGGCTACACCGGCAGCAATATTCTCTCCGACAATCGGACCTGGGTTGGCGACGTTGATTCCAATGTATTTTCTATCATTGAACCACAAACTGGGCAAGGTCTTCCACCATCTTTCGAGGCCAATGCTACCTCTTTTACAGCTGGGTCAGTTCCATTTAGCTCCGCACGCCTCTCTCACTCCATATTCATCTACTCTTTTCCAGTAGTTCAAGGCCCAAAATTCGTTCGGCTTTACTTTTATCCAACATCGTATGGTAACTTTGAAGCCCACAAGTCCCTCTTTTCTGTCAAAGTTGGCAACTTCACCCTTCTCAAAGACTTCAATGCCTCACGGGTTGAAAAGGATGAGCAAATTACAAGAGAATACTGTATCTACGTAGAACCAGGTGAGAGACTAAACGTAACTTTCGTTCCTAGCATGAACCACTCCGATTCTTACGCTTTTATCAACGGGATCGAGGTCGTGTCTATGCCTCCTTCCCTTTATTACCGTTATCCCAATGTCTCGTTAAAGCTCGTGGGTACGGGTGATCAGATAATCGCATACCCAATTGACAATTATAAAGCTCTGGAGACACTTTACAGAGTAAATGTTGGTGAGACTCAGGTTCCACCAAGAAATGATACCGGTATGTTCCGTCATTGGAACTACGATCGTCCCTACTTGGTGAAGGAATATCCACAGAGTATTCAATTTAACTTTACAACTCCACCACACTATAAAAATGATGTGGCTCCAGATTACACCGCACCGGCCGCTGTATACTTAACAGCTCGAAGCTACGGGAAGGATGCGACCGAGGATTACAATGTAACTTGGGAGTTCATAGTGAACTCAGAGTTCACTCACATGATCAGGTTGCATTTCTGCGAGTTTAGCCCCAAGATCCAGCAAGAGAGCGATAGAGCTTTCCAGATTTTTATAGCTGATAATTTGGTTGAAAAATACGCCGATGTGATAAGCCTGAGTGGCGGCAACCTAATTCCTGTTTACAGGGATTATGCTGTGATGATGCCTAGACAAGGAAGCTCTAAGAAACTCAATCTTTCAATCAAGCTGCAGCGACTGCCCAAGGTCATGTTCACCAGATACCATGATGTCATATTGAATGGCATCGAAATTTTCAAAATAAGTGACGAAAATAACAATCTTGCTGAACCCAATTCCGATCCTCCTACACAACAAATATTGCAAACTCAAACTTCCAAACACAAAAAACCCATCATCGTGATCATAACTGTTGCCGCAGTTTCAGGTCTCGTGCTAGCATCTATTATTGGCATCATAGGTTTTCGGCGAAGGAGAAGAGCTCATGACACGAAAGAAAACTCCCGGATGACAAAGACTGAAGGGTCATCTCTTCCATCCCATTTGTGCCGATACTTCACCCTCGCAGAGATCAGAGCAGCCACAAACAACTTGGACGATGTTTTCATCGTCGGGGTTGGGGGGTTCGGCAACGTGTACAAGGGTCTCATCGATGGGGACACACCCGTTGCGATCAAACGCCTCAAACCGGGTTCCCAACAAGGTGCCAACGAGTTCAAGAACGAGATCGAGATGCTCTCCCAGCTTCGCCACCATAATTTGGTGTCCCTCATCGGTTACTGCAACGACGATGCTGAGATGATCCTCGTCTATGACTTCATGCCACGCGGCACTCTCCGCGAGTATCTCTACGGCGCTGATAACCAACCCCTTTCGTGGAAGCAGAGGCTGGAGATCCTATTGGGTGCAGCGAGAGGGCTGCAATATCTGCATGCAGGTGTGAAGCACAATATCATTCACCGTGACGTGAAGAGCACCAACATCTTGCTGGATGAGAAATGGAGAGCTAAGGTTTCGGACTTCGGGTTATCCAAGGTGGGACCAACGGGGATGTCGACCACCCACGTAAGCACGATCGTGAAAGGTAGCCTTGGGTATTTGGACCCCGAATACTACAAGCGTCAAAGGTTGACTCTCAAATCTGACGTGTACTCATTCGGTGTGGTACTTCTGGAGGTTCTTTGTGCGAGACCACCCCTGCTTCGTACCATGGACAAGCAGAAGGCAAGTTTGGTTGATTGGTTTCGGACATGTTATGATCGTGGAGACGTTAATCAGACGGTGGATCCATTTCTACAGGGTTCTATTTCATCAGAGTGTAAGAAATGTTACTGCCAGACGGCGTTGGGTTGTTTGCATGATGATGGGAATCAACGACCCTCAATGAGTGATGTTGTTGGGGCATTGGAGTTTGCAATGCAATTGGTGGAGAGTGAGGAAAACAACGACTTCGTTGGGACCCAATATGGGGGAAAGACAGAAGAAAGACCACTGGGGACACAGTGTGTTATGAGTGATGAAGGAAGCGATGTGCGTTTCACCAGTAGTGACACTGATGAATACGGGTCTAAGAGCAGCAAGGTGACCACACACTCTGCCAGTACTGAGGAACAACCTTTCGTTTCTGCTACGGTGTTCTCTGAGATTGGGAATCCAAGACCTCGCTAG 2628 0.4642 MVKFTINKIPNEISLRIFVVLFHLLFFLQVNSYYEPTENFAVNCGYTGSNILSDNRTWVGDVDSNVFSIIEPQTGQGLPPSFEANATSFTAGSVPFSSARLSHSIFIYSFPVVQGPKFVRLYFYPTSYGNFEAHKSLFSVKVGNFTLLKDFNASRVEKDEQITREYCIYVEPGERLNVTFVPSMNHSDSYAFINGIEVVSMPPSLYYRYPNVSLKLVGTGDQIIAYPIDNYKALETLYRVNVGETQVPPRNDTGMFRHWNYDRPYLVKEYPQSIQFNFTTPPHYKNDVAPDYTAPAAVYLTARSYGKDATEDYNVTWEFIVNSEFTHMIRLHFCEFSPKIQQESDRAFQIFIADNLVEKYADVISLSGGNLIPVYRDYAVMMPRQGSSKKLNLSIKLQRLPKVMFTRYHDVILNGIEIFKISDENNNLAEPNSDPPTQQILQTQTSKHKKPIIVIITVAAVSGLVLASIIGIIGFRRRRRAHDTKENSRMTKTEGSSLPSHLCRYFTLAEIRAATNNLDDVFIVGVGGFGNVYKGLIDGDTPVAIKRLKPGSQQGANEFKNEIEMLSQLRHHNLVSLIGYCNDDAEMILVYDFMPRGTLREYLYGADNQPLSWKQRLEILLGAARGLQYLHAGVKHNIIHRDVKSTNILLDEKWRAKVSDFGLSKVGPTGMSTTHVSTIVKGSLGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCARPPLLRTMDKQKASLVDWFRTCYDRGDVNQTVDPFLQGSISSECKKCYCQTALGCLHDDGNQRPSMSDVVGALEFAMQLVESEENNDFVGTQYGGKTEERPLGTQCVMSDEGSDVRFTSSDTDEYGSKSSKVTTHSASTEEQPFVSATVFSEIGNPRPR* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2540 875 ProSiteProfiles Protein kinase domain profile. 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2540 875 MobiDBLite consensus disorder prediction 826 875 - -
Apr4g2540 875 Gene3D - 232 422 - -
Apr4g2540 875 Gene3D - 38 201 - -
Apr4g2540 875 MobiDBLite consensus disorder prediction 827 865 - -
Apr4g2540 875 PANTHER OS07G0166700 PROTEIN 32 851 IPR045272 GO:0004714|GO:0006468
Apr4g2540 875 SMART serkin_6 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2540 875 Pfam Protein tyrosine and serine/threonine kinase 524 788 IPR001245 GO:0004672|GO:0006468
Apr4g2540 875 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Apr4g2540 875 Gene3D Transferase(Phosphotransferase) domain 1 594 810 - -
Apr4g2540 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Apr4g2540 875 CDD STKc_IRAK 524 790 - -
Apr4g2540 875 Gene3D Phosphorylase Kinase; domain 1 478 593 - -
Apr4g2540 875 Pfam Malectin-like domain 42 421 IPR024788 -
Apr4g2540 875 SUPERFAMILY Protein kinase-like (PK-like) 492 793 IPR011009 -
Apr4g2540 875 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 32 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2540 Apr-Chr4 34245945 34248899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2540 34 875 Receptor kinase-like Gene Family AT3G51550 45.270 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr4g2540 Malectin_like 1.8e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2540 - - aprc:113862548 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2540 4 34245945 34248899 Apr4g2540 4 34245945 34248899 ECH