Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2535 ATGATTAAGAGCCCAAAAGAAGCAGATTTCCCATTAAAACAAGAGGGTCATTCTCATTCAAGTGATCATGAAAAAACAAAGACTTCATCAAGCTCAGCACAATGGCCAAGATTGAAGAATCCAAGGATTGTTAGAGTATCTAAAGCCTTTGGAGGAAAAGATAGGCATAGCAAGGTTTGCACAATAAGAGGGTTAAGAGACAGGCGTGTGAGGCTATCAGTACCGACTGCCATCCAACTCTACGATCTGCAAGATAGGCTAGGGCTCAGTCAACCTAGCAAGGTTATTGATTGGTTGCTCAATGCAGCTAAGAATGAAATTGATGAACTTCCACCACTACCCAATATTCCACAAGTGAATAACTTCACCCTTGGTTATCCATCTGCTGTTACTTCAAATGAAGCTAGCTCCTCTCATTCTCAGCCTAATGAACAACTGTTTAATATTAATAGGAGCATTCAGTATTGGGAAGGTCCAAGCCAAAATTCTTTATGGAAATTAAAGCCTAAAGTTTCAGGAGAAGTGATTAGCACTGAAAAAGAAAATTGGGCAAATAGAAGTGTGGAGGATAAGCAAGAAGCCATTGAAGGTCCTAATGCACATGTTTTGCCAAACAATCTCTTATCAAGAGCAAACCATCCTTCATTCTTGGGCTTGCTAAATACTATGCCACATGGTTACCATTGGGAGCTTTCTAGTGGTGATGTTTCTCATCAGTTGGGAAACAATGGATTTACAAACCAAACAGACATACACAATACTAACATTGTACCTTTCCCATCAACATTGTCTTTATCAACTGGGAATTCTCAAATTCTGGTCTGTCCTCCAGGAGCAACACAACCATATTTCCCTTCACATGTTACAGCAATGGACATGGATCCCAGACAAATCAACCACTATCAGATGTTGAATTCAAGTTCTCAAAATCCATTGACAAATTCTCTCAATCATTCCTTCTGCTTAGCTATGATGACTCATAAGTCTCTCCATTCATCCAACAGCAGCAAAAGCCCATCCCAAAAAGACCAAGAGTTCCCTCCCAAATAA 1050 0.399 MIKSPKEADFPLKQEGHSHSSDHEKTKTSSSSAQWPRLKNPRIVRVSKAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLNAAKNEIDELPPLPNIPQVNNFTLGYPSAVTSNEASSSHSQPNEQLFNINRSIQYWEGPSQNSLWKLKPKVSGEVISTEKENWANRSVEDKQEAIEGPNAHVLPNNLLSRANHPSFLGLLNTMPHGYHWELSSGDVSHQLGNNGFTNQTDIHNTNIVPFPSTLSLSTGNSQILVCPPGATQPYFPSHVTAMDMDPRQINHYQMLNSSSQNPLTNSLNHSFCLAMMTHKSLHSSNSSKSPSQKDQEFPPK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2535 349 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 344 - -
Apr4g2535 349 MobiDBLite consensus disorder prediction 330 349 - -
Apr4g2535 349 MobiDBLite consensus disorder prediction 1 26 - -
Apr4g2535 349 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Apr4g2535 349 Pfam TCP family transcription factor 52 154 IPR017887 -
Apr4g2535 349 MobiDBLite consensus disorder prediction 1 38 - -
Apr4g2535 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 344 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2535 Apr-Chr4 34199885 34202928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2535 35 303 TCP Transcription Factor Family AT3G02150 41.844 6.76e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr4g2535 TCP 4.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2535 - - var:108327895 543.117