Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2533 ATGAAAATCGTAGAGGATTTCAGTGTAAAACCAACTTCTGCATCAGAAGAGTTACCTACTCAAACATCACTTCCCCTTACCTTCTTCGACATACTATGGTTAAGGTTACCACCTGTTCAACGCGTTTTTTTCTATGAATTTCCTCACCCACCCTCACTTTTTTTCAGTACCCTTCTTCCCAAACTCAGCCACTCTCTTGCTCTTACACTTGGTTACTTCTTCCCTCTTGCTGGACACCTCTCTTGGCCCGTTGACCCCAACAATCCCATCATCAAATACAACAATGGTGACACTGTTTCCCTCACTGTTGCTGAATCTGACGCTGATTTCAACCATCTAGCTGGCACGGATCTTTATGAAGCTAAAGAAATTCACCATCTTTTACCTCACCTGACCATATCCCATGAACAAGCTACGGTTGTGGCCTTGCAAGTCACTTTATTTCCAAACACTGGGTTTTCCATTGGAATCACTTCACACCATGCTATTCTTGATGGCAAAACTTCAACATCGTTTATCAAATCATGGGCTTATCTTTGCAGCAATCTTGGAGAATCAACCCCTTCTTTGACCCCTCAACTTTGTCCATTCTATGGAAGGGAATTAATCAAAGACCCCAATGAAATAAGTGCAAAATATGTCGGTGATTGGTTAAAGAATGGTGGACCCAACAACAGAAGTCTCATGGTTTGGGATCTGCAAGTTCCAGAAGATGCAATAAGAGGCTCATTTCAATTGTCACGTTCAGACATTGAAAAGCTCAAGCAATTTGCAGTGTCCAAGAAGAAAGGGAACAGCAACATTCACTTGTCAACATATGTGGTATCTGTTGCCTATGCATGGGTTTGTAGAGTGAAAGCAGAAGAAGTGAAGGAGAAAAGAGTTATGTTGGCTTTGAATGTTGATTGCAGGAATCGTTTAGAACCACCTCTTCCTCCATCATATTTTGGGAACTGTGTTGGGGTGAGACTTGCAGGTGCTGAAACAAGAGATTTGTTGGGGGAAGATGGAATAATTGTTGCTGTTGAAGCACTGATTGAGGCTTTGGAAACTCTGAAGGAAGGAGCACTGAGTGGAGCAGAAAATTGGTCATCATGGTTGCTTGATGGTCTTATAGGTGATGTCATGATAATTGGTGTTGCTGGGTCAAACAGGTTTGAGGCTTATAGTATTGACTTTGGTTGGGGAAAACCAAAGAAAGTGGAGATGGGGTCTATAGACAGAACTGGAGCATTTTGCTTTTCTGATAGCAGAAATGGTGATGGGGTTGAGATAAGTTTTGTGTCCAAGAAAGCAGCAATGGAGGCTTTTGGTTCTCTCTTTGTCAGTGGCCTTGAGTCCCTTGGGTAG 1350 0.4252 MKIVEDFSVKPTSASEELPTQTSLPLTFFDILWLRLPPVQRVFFYEFPHPPSLFFSTLLPKLSHSLALTLGYFFPLAGHLSWPVDPNNPIIKYNNGDTVSLTVAESDADFNHLAGTDLYEAKEIHHLLPHLTISHEQATVVALQVTLFPNTGFSIGITSHHAILDGKTSTSFIKSWAYLCSNLGESTPSLTPQLCPFYGRELIKDPNEISAKYVGDWLKNGGPNNRSLMVWDLQVPEDAIRGSFQLSRSDIEKLKQFAVSKKKGNSNIHLSTYVVSVAYAWVCRVKAEEVKEKRVMLALNVDCRNRLEPPLPPSYFGNCVGVRLAGAETRDLLGEDGIIVAVEALIEALETLKEGALSGAENWSSWLLDGLIGDVMIIGVAGSNRFEAYSIDFGWGKPKKVEMGSIDRTGAFCFSDSRNGDGVEISFVSKKAAMEAFGSLFVSGLESLG* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2533 449 Pfam Transferase family 14 438 - -
Apr4g2533 449 Gene3D - 234 448 IPR023213 -
Apr4g2533 449 SUPERFAMILY CoA-dependent acyltransferases 243 447 - -
Apr4g2533 449 PANTHER - 7 446 - -
Apr4g2533 449 Gene3D - 1 220 IPR023213 -
Apr4g2533 449 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 7 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2533 Apr-Chr4 34185693 34187380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2533 42 437 Monolignol Biosynthesis Gene Families AT5G48930 25.735 1.87e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2533 - - gmx:102660160 677.167