Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2531 ATGGCTTCTCACAACAACATCAAAGTCCACGAGCACTCCTTCGTTGCTCCAACATCACTCACCCAAACAGCATCCCTTCCTTTAACTTTCTTTGACTTGTTTTGGATCAGAAATCAGCCTGTTGAACGTATCTTTTTCTTCTCCTTCCATTCACAGTCACACTCATCTTTTTTCTTTGAAAAAGTGGTTCCAAATCTCAAAACCTCACTCTCTCATGCTCTCCAACACTTTTTTCCTCTTGCTGGCAAGATAGTTTGGCCCTGTGATTTCAAAAAACCGATCATTCATTACACTCCTGGCGACGCTGTTTCTTTTGTAGTTGCAGAATCTGATGCTGACTTCAATCACGTGTTATCCAACACACCCCATGAAACAGCAGTATCTCGTTCTTTAATACCCCACTTGGAATCTTCGGATTCTCATGCTTCTGTTATCTCTCTTCAGATAACTCTGTTCCCAAACAGAGGATTCAGCATAGGCATCAGCGCCCACCATGCTGTTCTTGATGGGAAGTCTTCAACTCTGTTCCTCAAAGCTTGGGCTTTTCTATGCCAAACCAACAATGAAGAATTATCTTCATCATCCTTAGTGCCAGAGTTAGTTCCTTTCTTTGAAAGAACGGTGATCAAAGAGCCAACTGAGTTAGGAGCTAGGATACATGATTGGACCGAAGTGTTATCCAAATTATTCCCTCATAAAAGCAACGATGGTCGAAGCTTGAAGATTCTACCTTCTCAACCAAAAATTGTGGACACAGTTCGAGCGACGTTCGTGCTCACCCGAGTAGATTTGGATAAGATTAAGAAAAGAGTATTGTCCAAATGGGATGATTTGAATGGAGGAGAATCGTCAAATTCAAAGCCAAAGACTTTATCAACCTTTGTTATCACATGTGCTTATACACTAGTTTGCATAGCTAAAGCCATAAAAGGGGTTCAAAAGGAAAGGCAGAAATTCGCTTTTGGGTTCACGGTGGATTGTAGGAACAGGTTAGAGCCTCCAATCCCCGAAAACTATTGTGGAAACTGTGTGTGGGGTCAATTGGTGGATACCGACCCATTGGACTTTATAAAGGAAGAAGGGGTTGTTATTGTTGCTAAGAGCATTTATAATAAAATAAAAAAGTTGGACGAGGGAGTTTTTCAAGGTGCTGATAAAGCACATGGTAGATATATTGCTTTGGCAAAAGAGGGAGTTGAAGTAATGGGAATAGCTGGGTCGAACCGATTTGGTGTTTATGGGATTGATTTTGGCTGGGGAAAGCCTTCTAAGGTGGAGATAACATCAGTCGATAGAGGCTTAACCTTTGGGTTCACAGAGAGCAAGGATGGTAAAGGTGGGGTTGAAGTTGGGCTTGTTCTCAATAAGCATGAGATGGATCTCTTTGATACCTTCTTTCATGGAGGGTTATGTGATGATTGA 1422 0.417 MASHNNIKVHEHSFVAPTSLTQTASLPLTFFDLFWIRNQPVERIFFFSFHSQSHSSFFFEKVVPNLKTSLSHALQHFFPLAGKIVWPCDFKKPIIHYTPGDAVSFVVAESDADFNHVLSNTPHETAVSRSLIPHLESSDSHASVISLQITLFPNRGFSIGISAHHAVLDGKSSTLFLKAWAFLCQTNNEELSSSSLVPELVPFFERTVIKEPTELGARIHDWTEVLSKLFPHKSNDGRSLKILPSQPKIVDTVRATFVLTRVDLDKIKKRVLSKWDDLNGGESSNSKPKTLSTFVITCAYTLVCIAKAIKGVQKERQKFAFGFTVDCRNRLEPPIPENYCGNCVWGQLVDTDPLDFIKEEGVVIVAKSIYNKIKKLDEGVFQGADKAHGRYIALAKEGVEVMGIAGSNRFGVYGIDFGWGKPSKVEITSVDRGLTFGFTESKDGKGGVEVGLVLNKHEMDLFDTFFHGGLCDD* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2531 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 473 - -
Apr4g2531 473 Gene3D - 2 228 IPR023213 -
Apr4g2531 473 Pfam Transferase family 7 463 - -
Apr4g2531 473 Gene3D - 249 471 IPR023213 -
Apr4g2531 473 PANTHER - 4 473 - -
Apr4g2531 473 SUPERFAMILY CoA-dependent acyltransferases 291 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2531 Apr-Chr4 34169912 34171536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2531 7 466 Monolignol Biosynthesis Gene Families AT5G48930 23.830 2.87e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2531 - - gmx:100815354 628.246