Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2530 ATGGCTTCTGTGGAAAACTCTGTGAAAACCCTTGAGCACTGCATCGTTTCTCCTTCATCTGCAACCCACTTCACTCTCCCTCTAACCTTCTTTGACCTTTTCTGGCTAAGGTTCCATCCAGTTGAGCGCATCTTCTTCTATTCCCTCCATGCTCCACAATCACACCCTTCATTTTTCTTTCACAACGTGGTTCCAAAGCTCAAAACCTCACTCTCTCACACCCTCCAACACTTCCTCCCTTTAGCTGGTAACATCGTTTGGCCTTCTGATTCTCCCAAACCCTTCATCCAATTCAACCCTGGTGATGATGGTGTCTCCTTAGTCCTAGCACAGTGTGATGATGATGAATGCTTCAATCACGCCTTGGATTATTCACCCCGTGATGCCACAGAATCTCGTGCTTTGGTACCCCACTTGGAATCATCAGATTCTGTTGCTTCAGTTATCTCCTTGCAGATAACCCTTTTCCCGAACAAGGGCTTTTGCATTGGCATCAGCGCTCACCATGCTGTTCTTGATGGAAAATCTTCAACTATGTTCATCAAGGCTTGGGCATATGTATGTAAATCCAGCAAAGAAGAATCATCATCACCAACATCTTTGGTGCCAGAGTTAGAGCCTTTCTTTGAAAGGGAACTCATCAAAGATCCAATTGGTTCTCTTGAAAAAGTGTTCATAGATAACTGGTTACAGATTCCATCACAATTAAAGGACCATTTTGAAACCAGCAACGGACGGAGCTTAAAGATTATGTCAACACCCATTCAGAACCATTCAGTTCGAGCCACGTTCGAGCTCACACGTGGAGATTTGGATAAGATAAAGAAAAGGGTGTTATCCAAGTGGGAATCAGTGGCAGAAGAAGCAAAACCAATATTCACTTCTTCAAAACCTAGTACTTTGTCTACCTTTGTCATTTCCTGTGCTTATGTATCTGTGTGCATTGCTAAAGCCTTTCAAGAAGCAGAAAAGGTTGAAAAATTCGTTTTGGGGCTCAATGCTGATTGCAGGGCTCGGTTAGAGCCTCCAATCCCTGAGAACTATTTCGGCAACTGTGTGGTTTCTCATGCAGCGGATACACAATCGAAGGATTTTATAAAAGAAAATGGGGTGGTTATTGTTGCTAAGAAGATTTGGAATAAAGTAAAAATGCTTGATAAGGGAGCATTTGATGGAGTAGATACATATATTCCTAGGCTTATGTCTATGTTAAGTGAGGGAGTTAAGGTAATTGGAGTTGCTGGGTCGAACCGGTTCGGTCTTTATGGAACTGATTTTGGTTGGGGAAGACCTGCTAAGGTGGAGCTGACATCGGTCGATAGAGGTTTAACCATTGGGTTGGTAGATAGAAAGGACGGGTCTAGTGGGGTTGAAGTGGGGCTCGTTCTGAACGAGCATGTGATGGATCTGTTTCATGAAATTTTCCATTCAGGGTTACACTATGATTGA 1449 0.4327 MASVENSVKTLEHCIVSPSSATHFTLPLTFFDLFWLRFHPVERIFFYSLHAPQSHPSFFFHNVVPKLKTSLSHTLQHFLPLAGNIVWPSDSPKPFIQFNPGDDGVSLVLAQCDDDECFNHALDYSPRDATESRALVPHLESSDSVASVISLQITLFPNKGFCIGISAHHAVLDGKSSTMFIKAWAYVCKSSKEESSSPTSLVPELEPFFERELIKDPIGSLEKVFIDNWLQIPSQLKDHFETSNGRSLKIMSTPIQNHSVRATFELTRGDLDKIKKRVLSKWESVAEEAKPIFTSSKPSTLSTFVISCAYVSVCIAKAFQEAEKVEKFVLGLNADCRARLEPPIPENYFGNCVVSHAADTQSKDFIKENGVVIVAKKIWNKVKMLDKGAFDGVDTYIPRLMSMLSEGVKVIGVAGSNRFGLYGTDFGWGRPAKVELTSVDRGLTIGLVDRKDGSSGVEVGLVLNEHVMDLFHEIFHSGLHYD* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2530 482 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 481 - -
Apr4g2530 482 Gene3D - 3 242 IPR023213 -
Apr4g2530 482 Gene3D - 256 482 IPR023213 -
Apr4g2530 482 PANTHER - 5 481 - -
Apr4g2530 482 Pfam Transferase family 8 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2530 Apr-Chr4 34165196 34167158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2530 8 475 Monolignol Biosynthesis Gene Families AT5G48930 24.330 3.21e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2530 - - gmx:100813762 693.73