Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2529 ATGGCTTCAATCAATGGCCGTAAAGCAAGTGAGATCTTCGAAGGCCAAGCTCTCTTATACAGACACATATATGCTTTCATAGACTCCATGTGTCTAAAATGGACCGTTGAGCTTGACGTACCAAACATAATCCACAACCATGGCCAACCCATTACTCTTCAAGAGTTGGTTTCTATTCTACAAGTTCCACCAACTAAAATTGGCAAGGTGCAAAGTATCATGCGCTACATGGCACACAGTGGTTTCTTTGAAATAGTAAGAATCCATAACAAAAAAGAAGACAATGAAGCATATGCTCTCACAGTTGCATCAGAGCTACTTGTTAAAGGCACCAACTTTTGCTTAGCTCCAATGGTCGAGTGTGTTCTTGACCCAACTCTTTCAGGTTCTTACCATCAATTGAAAAGGTGGATTTATGAGAAAGATCTCACACTATTTGGTGTCTCTTTAGGATCACATTTTTGGGACTTTCTTAATGAAAATCCTGCATATAATACCTCATTCAATGAAGCAATGGCTAGTGATTCTCAAATGATCAACTTGGCACTGAGAGATTGTAATTTGGTCTTTGAGGGATTGGAGTCTATCGTGGATGTTGGTGGTGGAACTGGAACCACAGCCAAGATTATCTGTGATGCATTTCCTCAATTGAAATGCATTGTGTTTGATCGTCCACAGGTTGTAGAGAACTTGTTGGGAAGCAACAATTTAACTTATGTTGGTGGGGACATGTTTGAATCTATTCCAGAGGCTGATGCAATTCTACTTAAGTGGATTTTACATAATTGGACTGATGAAAATTGCATAAAGATATTGAAAAATTGTAAAGAAGCTATTTCAGATAATGGTGAGAGAGGGAAAGTAATTCTCATAGATATTGTGATATATCAAAAGCAAGATGAGCACGAAGTTACTGGACTAAAGCTCCTTATGGATGTAAACATGGCATGTCTCAATGGAAAAGAGAGAACTGAAGAAGAATGGAAGAAGATCTTCTTGGAAGCAGGGTTCCAAGACTACAAAATATCTCCTTTGACTGGACTTTTGTCCGTTCTTGAGATATATCCTTAA 1071 0.3847 MASINGRKASEIFEGQALLYRHIYAFIDSMCLKWTVELDVPNIIHNHGQPITLQELVSILQVPPTKIGKVQSIMRYMAHSGFFEIVRIHNKKEDNEAYALTVASELLVKGTNFCLAPMVECVLDPTLSGSYHQLKRWIYEKDLTLFGVSLGSHFWDFLNENPAYNTSFNEAMASDSQMINLALRDCNLVFEGLESIVDVGGGTGTTAKIICDAFPQLKCIVFDRPQVVENLLGSNNLTYVGGDMFESIPEADAILLKWILHNWTDENCIKILKNCKEAISDNGERGKVILIDIVIYQKQDEHEVTGLKLLMDVNMACLNGKERTEEEWKKIFLEAGFQDYKISPLTGLLSVLEIYP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2529 356 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171
Apr4g2529 356 Gene3D Vaccinia Virus protein VP39 108 356 IPR029063 -
Apr4g2529 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 356 IPR016461 GO:0008168
Apr4g2529 356 CDD AdoMet_MTases 196 296 - -
Apr4g2529 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Apr4g2529 356 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 355 - -
Apr4g2529 356 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Apr4g2529 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 353 IPR029063 -
Apr4g2529 356 PANTHER O-METHYLTRANSFERASE 2 355 IPR016461 GO:0008168
Apr4g2529 356 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Apr4g2529 356 Gene3D - 1 107 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2529 Apr-Chr4 34158282 34159817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2529 25 342 Monolignol Biosynthesis Gene Families AT5G54160 33.129 2.66e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2529 K22588 K13262 gmx:100813225 581.252