Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2523 ATGGAGCAAAGACAGATCTTTGTTCATATGGTGCTTTTGTTGTTTACGGTCAATGTTATAGCAAGTTATGTCACTGTTAAAGCAGAAGTAGAAGGATCCGAATCAACTGATAGGATTTTGGAACTACCAGGGCAACCCAAGGTGTCGTTTCAGCAATTTTCTGGCTATGTTACTGTCAACAAGGTTGCTGGTAGAGCACTCTTTTACTGGCTCACTGAAGCACCCCAAAATCCTCTCACCAAACCCCTTGTCATTTGGCTTAATGGAGGTCCAGGTTGTTCATCAGTGGCATATGGAGCATCCGAAGAGATTGGGCCATTTAGAATAAATAAAACAGCTTCTGGGCTATACATTAACAAATTCGCATGGAACACTGTGGCCAACCTCTTATTCTTGGAAACTCCGGCCGGCGTTGGCTTCTCCTACACCAACCGCTCCTCCGACCTATTCAACACCGGCGACCGCCGCACCGCCCAAGATTCTCTGGAATTCGTTGTTCAATGGTTAGAACGATTCCCGCGTTATAAGAATAGGGAACTTTATATCACTGGAGAGAGCTATGCAGGCCACTATGTCCCTCAATTAGCTAAGGAAATCATGACATATAACACAAAAACCAAGCACCCCATCAACCTCAAAGGAATAATGGTTGGAAATGCAGTGACAGACAACTACTATGATAACTTGGGCACAGTTACGTACTGGTGGAGCCATGCTATGATCTCCGACCAGACTTACCGGCAACTCATTAGTACGTGTGACTTTCACCGGCAGAAGGAATCTGATGAGTGTGAATCTCTATATAGCTATGCCATGGATCAAGAATTCGGAAACATTGATCAGTACAATATCTATGCTCCTCCATGCAACAACTCTGATGGTAGGTGGAAATTTATTTATTCTCAGGCTGTTAGGAAATTGTCTGGTTATGATCCATGTACGGAAAAGTATGCAGAGATTTACTACAACAGGCCAGATGTTCAGAAAGCACTTCATGCTAACACAACCGGGATTTCTTATAAATGGACTGCATGCAATGAGGTTTTGAACCGAAACTGGAACGATACAGATGTATCTGTTCTTCCAATTTATAGAGAGTTGATAGCTCACGGAGTGAGACTTTGGGTGTTCAGTGGGGACGTGGACTCGGTTGTGCCAGTCACAGCAACAAGATATGCCCTTGCACAGCTTAAGTTGTCTACTAAGACACCATGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGGTGGACAGAGGTGTATGAAGGGGTAACATTTGCCACAGTGAGAGGAGCAGGGCATGAAGTTCCACTATTCAAGCCCAGAGCAGCCCTTCAGTTATTCAAATCATTCCTTGCAGGAAAGCCTCTACCAAAGTCCTAA 1383 0.4432 MEQRQIFVHMVLLLFTVNVIASYVTVKAEVEGSESTDRILELPGQPKVSFQQFSGYVTVNKVAGRALFYWLTEAPQNPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYINKFAWNTVANLLFLETPAGVGFSYTNRSSDLFNTGDRRTAQDSLEFVVQWLERFPRYKNRELYITGESYAGHYVPQLAKEIMTYNTKTKHPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLISTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGRWKFIYSQAVRKLSGYDPCTEKYAEIYYNRPDVQKALHANTTGISYKWTACNEVLNRNWNDTDVSVLPIYRELIAHGVRLWVFSGDVDSVVPVTATRYALAQLKLSTKTPWYPWYVKNQVGGWTEVYEGVTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2523 460 Pfam Serine carboxypeptidase 44 453 IPR001563 GO:0004185|GO:0006508
Apr4g2523 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Apr4g2523 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 459 IPR001563 GO:0004185|GO:0006508
Apr4g2523 460 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Apr4g2523 460 Gene3D alpha/beta hydrolase 34 291 IPR029058 -
Apr4g2523 460 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 25 14 459 - -
Apr4g2523 460 SUPERFAMILY alpha/beta-Hydrolases 35 458 IPR029058 -
Apr4g2523 460 Gene3D - 313 350 - -
Apr4g2523 460 Gene3D - 360 454 - -
Apr4g2523 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Apr4g2523 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Apr4g2523 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Apr4g2523 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2523 Apr-Chr4 34096328 34102697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2523 318 457 Calmodulin-binding Proteins AT2G22960 31.915 2.59e-17 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2523 4 34096328 34102697 Apr4g2523 4 34096328 34102697 ECH