Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2522 ATGGCTGTAGAGGAGTCTGAGCCTGTGATTCCGGAGTTAGAAAGGGAGGAGAGCTTAATTGCTGCTGCAAGGCATATTGTGAAGGCATTGGGGTCAAATAAGAACTTAACTAGTGATGCCAAGAAAATTCTGGCAGATCTTGGCACTCAATTGTCTTCCATGACCATACCAAGTGAGAAGGAGGAGGGGAAACAAAGGCAAGGGAAGGGTGACGGTGGCGATCATGATGGTGATGACGGCGACGATGATGATGAGGGTGTTAGTGCTATCGAAGAACGGCTTGGTGTGATTCAGGAGAAAATAATGAAATGGGAGGAAGATCAGTCCATGATTTGGGATATGGGACCTGAAGAAGCATCTGAGTATTTGCATGCTGCTAATGAAGCACGCCGGTTGATTGAGAAGTTGGAAAGTTTACATTTGAAGAAAGAGGACCTAGAGTATAAGTTTATGCAGAGGGCTTATAGTGTTCTTCAAACAGCTATGGCAAGGCTTGAAGAAGAATTCAGGAACTTGCTTATCCAGAACAGGCAACCTTTTGAACCTGAATACGTCTCTTTTCGGTCCAGCGAGGAAGATCCTGTTGATGAAAACTCTATAGTCTCTTTAGGTGATGAATCAGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCCTCTGAGGAGCATATCATTGATTTGGTTCATCCAGCTGTGATCCCAGATGTCAGGTGTATTGCAAACTTGCTTTTTGCTTCTAATTATGTCCAGGAATGTTCCAATGCTTATACCATTGTTCGGAGAGATGCATTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTTAGCATTGAGGATGTCTTGAAAATGGAGTGGGGTACTTTGAATTCAAAAATCAAAAGATGGATTTGGGCAGTGAAAATCTTTGTTAGGGTGTATCTAGCAAGTGAGAGGTGGCTTAGTGACCAGATTTTTGGGGAGGGTGAGCCTGTTAGTCTAGCTTGTTTTGTTGATGCATCTAAGGCTTCAATATTGCAGCTTCTGAATTTCAGTGAAGCCATGTCTATTGGCCCTCACCAACCTGAGAAATTGTTCCGAATCCTTGACATGTATGAGGTTCTTGCAGACCTCATGCCAGACATTGATGCTTTGTATTCAGATGAGGTTGGTTCTTCTGTTAAAATTGAATGTCATGAGGTTCTGAAGAGATTAGGTGATTGTGTGAGGGCAACATTTCTTGAATTTGAAAATGCCATTGCCACAAATGTATCATCGACCCCTTTTGTAGGTGGTGGGATACATCCTTTGACCAAATATGTTATGAATTATCTTAGGACTCTTACTGACTACAGCGAAATACTTAATCTGCTTCTGAAGGACCAAGAAGAAGAGGATGCCATTTCGCTGTCACCTGACATGAGCCCAGGTACAGAAGAAGATAGTAGAAGCCAGGGATCTCCTGGTAGAGTTTCCTCAATGGCCCTCCACTTTCGGTCAATTGCTTCAATCTTGGAAAGCAACCTTGACGAAAAGTCCAAGTTATACAAAGAGGCCTCCTTGCAGCACTTGTTCTTAATGAACAACCTACATTATATGGCTGAAAAGGTTAAGGGGTCTGAACTCAGGCTCGTATATGGAGATGAATGGATTCGAAAGCGCAACTGGAAGTTTCAGCAGCATGCAATGAAGTATGAAAGAGCTAGTTGGAGTTCCATTCTCAATTTGCTTAAGGATGAGGGAATTCATCTTCCAGGCACAAATTCTGTCTCGAAAAGTCTTCTTAAAGAGAGGTTACGCAGCTTCTACCTTGGCTTTGAGGATGTTTACAGGATCCAGACAGCTTGGCATATTCCAGATGTTCAGCTTCGTGAAGACTTGCGAATTTCTATATCCCTCAAAGTAATACAAGCTTATAGGACATTTGTTGGGAGGAATAATAGTCACATAACCGACAAACACATTAAATACACTGCTGATGATTTAGAAAACTACCTTTTGGATTTCTTTGAAGGATCCCAAAAGTGGTTACAAAATCCCCATAGAAGGTGA 2034 0.4223 MAVEESEPVIPELEREESLIAAARHIVKALGSNKNLTSDAKKILADLGTQLSSMTIPSEKEEGKQRQGKGDGGDHDGDDGDDDDEGVSAIEERLGVIQEKIMKWEEDQSMIWDMGPEEASEYLHAANEARRLIEKLESLHLKKEDLEYKFMQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSSEEDPVDENSIVSLGDESVEESLQRDSVSRASEEHIIDLVHPAVIPDVRCIANLLFASNYVQECSNAYTIVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVSLACFVDASKASILQLLNFSEAMSIGPHQPEKLFRILDMYEVLADLMPDIDALYSDEVGSSVKIECHEVLKRLGDCVRATFLEFENAIATNVSSTPFVGGGIHPLTKYVMNYLRTLTDYSEILNLLLKDQEEEDAISLSPDMSPGTEEDSRSQGSPGRVSSMALHFRSIASILESNLDEKSKLYKEASLQHLFLMNNLHYMAEKVKGSELRLVYGDEWIRKRNWKFQQHAMKYERASWSSILNLLKDEGIHLPGTNSVSKSLLKERLRSFYLGFEDVYRIQTAWHIPDVQLREDLRISISLKVIQAYRTFVGRNNSHITDKHIKYTADDLENYLLDFFEGSQKWLQNPHRR* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2522 677 Coils Coil 87 107 - -
Apr4g2522 677 MobiDBLite consensus disorder prediction 462 484 - -
Apr4g2522 677 Gene3D Exocyst complex component Exo70 99 672 - -
Apr4g2522 677 SUPERFAMILY Cullin repeat-like 107 665 IPR016159 -
Apr4g2522 677 Pfam Exo70 exocyst complex subunit 295 661 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr4g2522 677 MobiDBLite consensus disorder prediction 49 86 - -
Apr4g2522 677 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 671 - -
Apr4g2522 677 MobiDBLite consensus disorder prediction 59 75 - -
Apr4g2522 677 Coils Coil 119 175 - -
Apr4g2522 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 671 IPR004140 GO:0000145|GO:0006887
Apr4g2522 677 MobiDBLite consensus disorder prediction 469 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2522 Apr-Chr4 34089071 34092048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2522 12 677 EXO70 exocyst subunit family AT3G29400 48.895 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2522 K07195 - gmx:100799102 1217.6