Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2495 ATGGGTTCATATTCTACAATGGAAGAGAACCATGTGGTGGTGGACGGTGCCACCCCACAAAGAGATGATAGTGATACCCTCTTTGCCATGGTTCTTGGTGCCAATATGGTATTTCCTGCAGCTCTTAATGCTGCAATTCAGCTCAACTTGTTTGAGATAATTGCAAAGGAAAGCACAAAAGAAAGTGGTGGCTTCATGTCACCCTTTGAAATTGCTTCAAAGTTAACAACCCAACACTACTCTGACTTGCCAAATAGACTTGACCGTTTTCTTCGCCTGCTTGCTAGTTACTCTCTTCTTGCTATTTCCACTCGCACCAATAAGGATGGTAGCACTGAGAGGGTTTATGGGATTTCACCAGCTGGTAAATATTTCGTCGATGATGAAAATAGTGATGGCTATCTCGCCTCGTTCACATCATTTCTTTGTCACCGTGCCTTGTCAGGAGTATGGTTGAACTTTAAGGAAGCAGTTGTTGATCCTGAAATCGATCTATTCAAGAAAGTTAATGGCATATCGAAGTATGAATACTTCGGAAAAGATCCGGAAATAAACCACGTATTTAACAAGTCAATGACTGATATATGCTCAACCCATATGAAAAGAGTACTTCAACTATACAAAGGATATGAGGGAATATCAACTTTGGTTGACGTAGGAGGTGGAAATGGACAAAGTCTCAAGATGATCGTATCCAAATATCCATCAATTAAGGCTATCAACTTTGACCTTCCACAAGTGATTCAACACGCACCACCCCTTTCAGGTATTGAGCATGTTGGAGGAGATATGTTTGAAAGCGTCCCACAGGGTGACGCCATCATCCTAAAGGCTGTATTGCATAATTGGTCGGATGAAAAGTGCGTAGAGATTTTGAGAAATTGTTACAAAGCTTTGCCAGCAAATGGGAAGGTCATAATCGTGGAGCTCGTTCTGCCAGAAAATCCAGAAGCAACAGATGCATCTAAAATGATTTCAATTCTTGACAACATCATGTTTATTACAGCTGGTGGAAGGGAAAGAACTGAGAAACAGTATGAGAGTTTGGGTAAGCGTGCTGGATTTTCTAAGCTTCAAGTAGCTTGTTGCGCTTTCTCTATTTTGGGAGTGATGGAGCTTTACAAATGA 1128 0.4122 MGSYSTMEENHVVVDGATPQRDDSDTLFAMVLGANMVFPAALNAAIQLNLFEIIAKESTKESGGFMSPFEIASKLTTQHYSDLPNRLDRFLRLLASYSLLAISTRTNKDGSTERVYGISPAGKYFVDDENSDGYLASFTSFLCHRALSGVWLNFKEAVVDPEIDLFKKVNGISKYEYFGKDPEINHVFNKSMTDICSTHMKRVLQLYKGYEGISTLVDVGGGNGQSLKMIVSKYPSIKAINFDLPQVIQHAPPLSGIEHVGGDMFESVPQGDAIILKAVLHNWSDEKCVEILRNCYKALPANGKVIIVELVLPENPEATDASKMISILDNIMFITAGGRERTEKQYESLGKRAGFSKLQVACCAFSILGVMELYK* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2495 375 CDD AdoMet_MTases 215 308 - -
Apr4g2495 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 372 IPR029063 -
Apr4g2495 375 Gene3D Vaccinia Virus protein VP39 127 375 IPR029063 -
Apr4g2495 375 Pfam Dimerisation domain 41 95 IPR012967 GO:0046983
Apr4g2495 375 PIRSF O-mtase 7 375 IPR016461 GO:0008168
Apr4g2495 375 PANTHER O-METHYLTRANSFERASE 1 375 IPR016461 GO:0008168
Apr4g2495 375 Gene3D - 6 125 IPR036388 -
Apr4g2495 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 375 IPR016461 GO:0008168
Apr4g2495 375 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
Apr4g2495 375 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 375 - -
Apr4g2495 375 SUPERFAMILY "Winged helix" DNA-binding domain 23 129 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2495 Apr-Chr4 33854869 33857409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2495 22 375 Monolignol Biosynthesis Gene Families AT5G54160 48.596 1.97e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2495 - - gmx:100798295 556.599