Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2494 ATGGGTTCCTATTCCTTAGAAAAAGAGAACCATACCTCACAAAGAGATGACACTGATGTCGTCCTCTTAGCCATGGTGCTTGGTTCCAATGTGGTTTTTCCTGCAGCTCTTAATGCTGCAATTCAGCTCAACTTGTTTGAGATCATTGCAAAGGAAAGCTCACCTGAGAGTAGTGGATTCATGTCACCCCTTGAAATTGCTTCCAAGTTACCAACTCAACACACTGATTTGCCAAATAGGCTTGATCGTATGTTACGTTTGCTTGCTAGCTACTCTCTCCTTACTGTTTCCACTCGCACCAATGAAGATGGTAGCATGGTGAGAGTTTATGGGATCTCATCATCTGGTAAATATTTCGTCTCTGATGAAAATGGTGATGGTTACCTCGCCTCATTCACATCATTTCTGTGTCACCGTGTGTTGTTAGAAGTATGGCTGAATTTTAAGGAAGTTGTTATTGATCCTGAGATAGACTTATTCAAGAAAGTTCATGGAATGTCCAAGTTCGAGTATTTTGGGAAAGACCCAGAGATAAATCACGTATTTAACAAAGCAATGGATGACATATGCACAACTCATATGAAAAAAATACTTGGAGAATACACAGGATATGAGGGCATATCAACTTTAGTTGACGTAGGTGGGGGAACTGGACAATGTCTCAAAATGATTATCACCAAATACCCTTCAATTAAGGGGATTAATTTTGACCTCCCACATGTGATTGAAAACGCACCATCCCTTCCAGGGATTGAGCACATTGGAGGGAATATGTTTGAAGGTGTTCCACAGGGTGATGCCATAATACTAAAGGCTATATGCCATAATTGGTCGGATGAAAAATGCTTAGAAGTTTTAAGCAATTGTCACAAAGCTTTGCCACCAAATGGGAAGGTCATTGTTGGGGATTTCATACTGCCAGAAGAGCCAGAACCTACAAAAGAATATAAAGTGATCTCAATTCTTGATAACATCATGTTTATTACACCTGGTGGAAGGGAAAGAACAGAGAAACAATTTGAGAGTTTGGGAAAGCATTCTGGATTTTCTAAGTTTCAAGTTGTTTGTCGTGTTTTCTCTTCACTCGGAGTGATGGAATATTACAAATAA 1110 0.3964 MGSYSLEKENHTSQRDDTDVVLLAMVLGSNVVFPAALNAAIQLNLFEIIAKESSPESSGFMSPLEIASKLPTQHTDLPNRLDRMLRLLASYSLLTVSTRTNEDGSMVRVYGISSSGKYFVSDENGDGYLASFTSFLCHRVLLEVWLNFKEVVIDPEIDLFKKVHGMSKFEYFGKDPEINHVFNKAMDDICTTHMKKILGEYTGYEGISTLVDVGGGTGQCLKMIITKYPSIKGINFDLPHVIENAPSLPGIEHIGGNMFEGVPQGDAIILKAICHNWSDEKCLEVLSNCHKALPPNGKVIVGDFILPEEPEPTKEYKVISILDNIMFITPGGRERTEKQFESLGKHSGFSKFQVVCRVFSSLGVMEYYK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2494 369 Gene3D Vaccinia Virus protein VP39 122 369 IPR029063 -
Apr4g2494 369 SUPERFAMILY "Winged helix" DNA-binding domain 17 123 IPR036390 -
Apr4g2494 369 PANTHER O-METHYLTRANSFERASE 1 369 IPR016461 GO:0008168
Apr4g2494 369 Gene3D - 3 119 IPR036388 -
Apr4g2494 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 369 IPR016461 GO:0008168
Apr4g2494 369 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
Apr4g2494 369 PIRSF O-mtase 2 369 IPR016461 GO:0008168
Apr4g2494 369 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Apr4g2494 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 358 IPR029063 -
Apr4g2494 369 CDD AdoMet_MTases 209 306 - -
Apr4g2494 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2494 Apr-Chr4 33851024 33853111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2494 1 359 Monolignol Biosynthesis Gene Families AT5G54160 50.556 5.57e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2494 - - gmx:100798295 615.15