Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2489 ATGTCCACCAACAACGCCGATTCCGTCACGGCGCCGCCACCGCGCCCCACCATAACTCTCCCTCCCCGTCCCTCTGCCGAGGCCTTCTTCGCCGGCGGCGGCGGCGCCAGTCCCGGCCCTATGACCCTCGTCTCTAGCTTCTTCGCTTCCGACTCCGGCGACTGCCGCTCCTTTTCTCAGCTCCTCGCCGGAGCCATGGCCTCTCCGATGGCTTTCTCCGCCGCCGACAATTCCTTCAAAGAAGAAGATGGGACCCACAAAGGTTTCAAGCAGAGTAGACCCATGAATTTGGTGATTGCTCGTTCTCCAATCTTCACTGTTCCACCTGGCTTGAGCCCTTCTGGGTTTCTCAACTCTCCTGGCTTCTTTTCCCCTCAGAGCCCCTTTGGGATGTCCCACCAACAGGCATTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCTCATATGCACATGCAAGCTGAATACCAGCCGCCTGCAGTAACAGCTACCACTGAACTGCCTGTACAGCAGCCATCTTTTGCTCTAAATGAAGCTTCAGAGCAGCAAATGGTATCATCTGTATCTGAACCTAGAAATGCTCAACTGGAAATGTCAGAGCTCTCACACGGTGATAAGAAATATCAAGCATCTTCCCTGGCCATTGACAAACCTGCAGACGATGGCTACAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAAGGTAGTGAGTTTCCACGGAGCTACTATAAGTGCACACATCTGAATTGCCCTGTGAAGAAAAAAGTTGAGCGTGCTCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAACCGCAGGCAAATAGGCGTGTCAAAGATAATAGTGATTCAAATGGAAATGCAAATGTTCAACCTAAGACTGAGTCTAACTCACAAGGTTGGGTTGGACATTTAAACAAGTTTAGTGAAACTGTGCCTGATTGTTCAGTACCTGAGAGTGACCAGACCTCCAATCAAGGGGCACCCAGGCAGCTACTACCTGGATCAAGTGAGAGTGAGGAAGTCGGTGATTTAGATAATAGGGAAGAGGGGGATGACAGTGAGCCAAATCCTAAGAGAAGGAACACTGATGTTGGGGTTTCTGAAGTACCTCCGTCTCAGAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGTGAAGTTGATCTCCTGGATGATGGCTACAGATGGCGAAAGTATGGTCAAAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTAGTGCAGGGTGCAACGTGCGCAAGCATGTTGAGAGAGCTTCAACAGACCCTAAAGCTGTCATAACTACATACGAAGGTAAACATAATCATGATGTGCCTGCTGCTAGAAACAGCAGCCACAACACAGCTAGTACCAATTCAATGCCACTAAAATCACACAATGTGGTGCCAGAGAAGCATCCTTTGCTTAAGGATATGGATTTTGGAAGCAATGACCAAAGACCTGTACATTTGCGCTTAAAAGAAGAGCAAATCATAGTATAG 1545 0.4828 MSTNNADSVTAPPPRPTITLPPRPSAEAFFAGGGGASPGPMTLVSSFFASDSGDCRSFSQLLAGAMASPMAFSAADNSFKEEDGTHKGFKQSRPMNLVIARSPIFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQAEYQPPAVTATTELPVQQPSFALNEASEQQMVSSVSEPRNAQLEMSELSHGDKKYQASSLAIDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPQANRRVKDNSDSNGNANVQPKTESNSQGWVGHLNKFSETVPDCSVPESDQTSNQGAPRQLLPGSSESEEVGDLDNREEGDDSEPNPKRRNTDVGVSEVPPSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTASTNSMPLKSHNVVPEKHPLLKDMDFGSNDQRPVHLRLKEEQIIV* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2489 514 MobiDBLite consensus disorder prediction 269 285 - -
Apr4g2489 514 MobiDBLite consensus disorder prediction 320 340 - -
Apr4g2489 514 PANTHER WRKY TRANSCRIPTION FACTOR 73 9 512 - -
Apr4g2489 514 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 512 IPR044810 GO:0003700
Apr4g2489 514 Gene3D WRKY domain 385 461 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 Gene3D WRKY domain 207 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 MobiDBLite consensus disorder prediction 1 33 - -
Apr4g2489 514 SUPERFAMILY WRKY DNA-binding domain 219 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 MobiDBLite consensus disorder prediction 269 385 - -
Apr4g2489 514 MobiDBLite consensus disorder prediction 456 479 - -
Apr4g2489 514 MobiDBLite consensus disorder prediction 286 312 - -
Apr4g2489 514 SUPERFAMILY WRKY DNA-binding domain 392 460 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 MobiDBLite consensus disorder prediction 462 479 - -
Apr4g2489 514 Pfam WRKY DNA -binding domain 221 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 Pfam WRKY DNA -binding domain 401 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 ProSiteProfiles WRKY domain profile. 215 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 SMART WRKY_cls 220 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 SMART WRKY_cls 400 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2489 514 ProSiteProfiles WRKY domain profile. 395 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2489 Apr-Chr4 33821565 33826744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2489 15 512 WRKY Transcription Factor Family AT2G03340 52.930 6.15e-153 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g2489 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2489 - - gmx:100796679 905.59