Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2485 ATGGATGGAGTAGCTGGGCAAGGCATGGTTCTACCAAATTATAAATTGGGAAAAACACTTGGCATTGGATCCTTTGGGAAAGTGAAAGTTGCAGAAAACGTATTCACTGGCCAAAAGGTTGCCATCAAGATCCTTAAACGTCGCACGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCGAAGTTTTAAGATTGCTCATACATCCTCAGATTATACAACTTTATGAGGTCATAGAAACTCCAAGCGACATATATCTTGTTATGGAGTATGTGGAATCTGGAGAGCTCTTTGATTATGTAGCAGAAAAGGGTAGGCTGCAAGAAGATGAAGCTCGCAATATTTTTCAACAGATAATCTCTGGTGTGGAACACTGTCACAGGAATATGGTGACTCACAGAGACATAAGGCCTGAGAAATTACTTTTGGATTCTGAATGTAATGTCAAGATTATTGGATTTGGTTGGAGTAGCATCATGCGTGATGCTCATTTTCTTAAGACAATTTGCGGAAGTTGTAACTATGCAGCTCCCGAGGTTATCTCTGGAAAATTGTATGCTGGACCCGAAATTGATGTCTGGAGCTGTGGTGTAATTCTATATTTTCTTCTTTGTGGCACTCTTCCCTTTTATGATGAAAACATTCCAAATCTCTTCAAGAAAATTAAGGGAGGGATATACACTCTTCCTTGTCATCTATCTCTTGGTGCAAGAGATTTGATACCAAGGATGCTGGAAGTCGACCAAGTGAAGAGGATGACCATACCTCAACTCCGTCAGCACCCATGGTTTCAAGCTCTTCTTCCACCTTCTTTAGTTGTTTCACCACCAAATACAATGCAACAGCCCAAAATGTAG 864 0.4016 MDGVAGQGMVLPNYKLGKTLGIGSFGKVKVAENVFTGQKVAIKILKRRTIKNMEMEEKVRREIEVLRLLIHPQIIQLYEVIETPSDIYLVMEYVESGELFDYVAEKGRLQEDEARNIFQQIISGVEHCHRNMVTHRDIRPEKLLLDSECNVKIIGFGWSSIMRDAHFLKTICGSCNYAAPEVISGKLYAGPEIDVWSCGVILYFLLCGTLPFYDENIPNLFKKIKGGIYTLPCHLSLGARDLIPRMLEVDQVKRMTIPQLRQHPWFQALLPPSLVVSPPNTMQQPKM* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2485 287 PIRSF STPK_Pim-1 7 277 IPR017348 GO:0004674|GO:0006468|GO:0043066
Apr4g2485 287 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 276 - -
Apr4g2485 287 PANTHER SERINE/THREONINE KINASE 10 276 - -
Apr4g2485 287 Gene3D Transferase(Phosphotransferase) domain 1 6 283 - -
Apr4g2485 287 CDD STKc_AMPK_alpha 11 266 - -
Apr4g2485 287 ProSiteProfiles Protein kinase domain profile. 14 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2485 287 Pfam Protein kinase domain 14 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2485 287 SUPERFAMILY Protein kinase-like (PK-like) 11 282 IPR011009 -
Apr4g2485 287 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2485 Apr-Chr4 33793305 33795392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2485 14 266 CBL-interacting serine-threonine protein kinases AT4G24400 46.850 5.13e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Apr4g2485 Pkinase 9.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2485 K07198 - gmx:100796687 471.855