Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2479 ATGGCAGCTTGCATATTCACGGTGTCACAGGATGGAACCGCAGATTTTCAAACGGTGCAGGAAGCAATCGACGTCGTCCCGTTCGGCAACACTCGCCGGACGGTGATTCGGGTCTCACCGGGAATCTACCGGCAGCCGGTGTACGTTCCCAAGACCAAGAATTTCATCACCCTCGCTGCTATGCGGCCTGAGGACATTGTGCTTACTTGGAACAACACTGCCACCGGAATCGATCACCACCAACCTGCGAGGGTGATAGGGACTGGGACGTTTGGTTGTGGAACTGCCATTGTGGAAGGGGAGGACTTCATTGCTGAGAATATTACTTTCGAGAATTCTGCTCCTCAGGGTTCGGGACAAGCAGTGGCAATTAGAGTAACAGCAGATCGATGTGCCTTCTACAATTGCAGATTCCTTGGGTGGCAGGACACACTGTACTTACATTATGGTAAACAATATTTGAAAGATTGCTACATTGAAGGTAGTGTGGACTTTATCTTTGGCAATAGCACCGCTCTTTTGGAGCATTGTCATATCCACTGCAAGTCTGAAGGCTTCATAACCGCACAGAGCAGAAAATCATCACAGGAAACAACTGGTTATGTATTCTTGAGATGTGTTATAACAGGTAATGGAGGAAATTCATATGCATATCTTGGACGACCATGGGGACCTTTTGGAAGGGTGGTCTTTGCATATACTTATATGGATCAATGTATAAGGCATGTTGGCTGGGATAACTGGGGGAAAATGGAGAATGAGAGGAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGTTGTCCATCCAAACGAGTAACATGGTGTAGAGAATTGTTGGATGAAGAAGCAGAGCAGTTCCTCACTCATCCTTTCATTGATCCAGAACCAGATAAACCTTGGCTAGCTCAAAGGATGGCCCTGAGGATTCCATATTCTGCTTAG 951 0.4669 MAACIFTVSQDGTADFQTVQEAIDVVPFGNTRRTVIRVSPGIYRQPVYVPKTKNFITLAAMRPEDIVLTWNNTATGIDHHQPARVIGTGTFGCGTAIVEGEDFIAENITFENSAPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSQETTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYMDQCIRHVGWDNWGKMENERSACFYEYRCFGPGCCPSKRVTWCRELLDEEAEQFLTHPFIDPEPDKPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2479 316 Gene3D - 3 310 IPR012334 -
Apr4g2479 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Apr4g2479 316 SUPERFAMILY Pectin lyase-like 3 299 IPR011050 -
Apr4g2479 316 PANTHER PECTINESTERASE 1 315 - -
Apr4g2479 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Apr4g2479 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2479 Apr-Chr4 33745381 33765583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2479 5 309 Carbohydrate Esterase AT5G47500 37.778 1.15e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2479 K01051 - gmx:100795636 653.669