Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2450 ATGGCTGGCCAACAGTACGATGACAGTGCCAACCTTAATATTCCGCTAATTGAAGACCAAACTCAACACTGGCGTGAAAGATCCCAAACTTCTGATAATGGTTCCAGCAATCTCAATACTTGCTTCAACGGCCTCAATGCTTTGTCAGGTGTCGGCATACTCTCAGTTCCATATGCTCTTGCTTCTGGAGGATGGATAAGCTTGGCTTTTCTGTTGGCTTTTGCTTCTACAGCTTATTACACAGCCCTTTTGATGGGAAGATGTATGGATAAGGATTCAAATATTAGAACCTATCCTGACATTGGGGAGCTTGCATTTGGAAAGACAGGAAGATTAATAGTATCACTGTTGATGTACACAGAACTGTACTTAGTTTCAACAGGGTTCTTGATTCTAGAAGGGGATAACTTGAATAACTTATTTCCCATTGGGGAGATTCAGATGGGTGGTTCAACAATTGGTGGAAAGCAATTCTTTGTGATATTGGTTGCTCTGATTATTTTGCCCACAGTGTGGTTGGACAACTTGAGTTTACTTTCTTATGTGTCTGCAAGTGGAGTGTTTGCTAGTGCTATCATCATCTTGTCGATAACATGGACTGGAGCGTTTGATGGAGTTGGTTTTCATCAAAAGGGAACTCTTGTTCACTGGGGTGGAATCCCTACAGCTGTTAGCTTGTACGCCTTTTGTTATTGTGCACACCCGGTGTTTCCCACCTTGTACAGTTCCATGAGGAAAAAACATCAATTCTCCAATGTCCTGCTAGTGTGCTTTCTGTTAACCACTGCCGGATATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTCCAGATGTTGAATCACAGGTAACATTAAACCTGCCACTAGATAAAGTAAGCTCCAAAATAGCAATATATACAACTTTGGTCAATCCCATATGCAAGTTTGCTTTGATGGCAACACCTATTACCAATGCTTTGAAAGATTTGCTTCCAAGGACGTACAAGAATAGGGTCACCAGCATCTTAGTCAGCACTGTCTTGGTAATCAGCACAACCATTGTTGCACTCGCTGTTCCTTTCTTTGGAGATCTCATGTCCCTTGTTGGAGCATTTCTAAGTGTCACTGCTTCTATTATGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGCACTTACAGGAAATTTGGGTTTGAGACTGTAGTCATAGGGGCAATAGTAGTAGCAGCTGTAGCAATGGGTGTATCTGGTACATACACTTCAGTCTATGAAATTGTTCACCATTTGTAA 1272 0.4159 MAGQQYDDSANLNIPLIEDQTQHWRERSQTSDNGSSNLNTCFNGLNALSGVGILSVPYALASGGWISLAFLLAFASTAYYTALLMGRCMDKDSNIRTYPDIGELAFGKTGRLIVSLLMYTELYLVSTGFLILEGDNLNNLFPIGEIQMGGSTIGGKQFFVILVALIILPTVWLDNLSLLSYVSASGVFASAIIILSITWTGAFDGVGFHQKGTLVHWGGIPTAVSLYAFCYCAHPVFPTLYSSMRKKHQFSNVLLVCFLLTTAGYASMAIIGYLMFGPDVESQVTLNLPLDKVSSKIAIYTTLVNPICKFALMATPITNALKDLLPRTYKNRVTSILVSTVLVISTTIVALAVPFFGDLMSLVGAFLSVTASIMLPCLCYLKISGTYRKFGFETVVIGAIVVAAVAMGVSGTYTSVYEIVHHL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2450 423 PANTHER OS05G0424000 PROTEIN-RELATED 37 420 - -
Apr4g2450 423 Pfam Transmembrane amino acid transporter protein 34 412 IPR013057 -
Apr4g2450 423 PANTHER AMINO ACID TRANSPORTER AVT1J 37 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2450 Apr-Chr4 33489287 33494772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2450 17 420 Amino Acid or Auxin Permease AAAP Family AT3G28960 60.247 1.18e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2450 K15015 - gmx:100794374 634.795