Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g2437 | TTCTTGACACTTTGGCCTTTTTTGATACAGTTAGAAGCAGCGTCTTTAGCATCGCATCATCGATTGGAAGCAAATGCTCTACTCAAGAGTGGGTGGTGGAATCAATCGCAGTTAGATTCATACAATGTATGTGAGTGGGATGGTTTAGTTTGCAACGATGCTGGAAGCATAACTCGAATCACTTATCCGTACTTTATTACATCAGGGATTCGATTGGCAACACTGAACCTGTCAGCTTTCAAGAATTTAGAAAGATTAGACTTTCGAAGAAGTGGACTTGAAGGGACTATCCCACCCCAAATTGGTAATCTCCCCAAACTCACTTATCTCGATATGTCCTACAATCATCTTGAAGGTGAGATTCCTCATTCACTAGCAAATCTTACCCAATTAGAGACCCTAATGATATCTAACAACTACTTCAATGGCACCTTCCCTCTTTCACTCCTAAACCTTACCAAATTGGAATACCTTGACATTTCCAACAATCAACTCCATGGTTCCCTCCCTTCTAATTTACATCAATTAACAAAATTGCGAGAGCTACTGTTAAATGACAACTCCTTCATTGGAACTTTGCCTTTTTCACTTACAAATCTCTCCCAATTGGCATGCCTTGACATTTCCAACAATCAACTTCGTGGTTCCCTCCCTTCTACTTTTCATCAATTAACAAACATGCGAGAGTTGCGGCTAGATAATAACTCAATTAGTGGAAACTTAGAACCCTTGGCAGCTTTAAGCAATCTTCCAATTATAAGCGTTATCGAACTCAGTTTCAACCAAATTACTGGTGAAATACCTCCAAACCTTGCATATTTACCAAGATTGAACATTTCCTACAATTATTTGAAGGGTCCCATTCCTGATGGTCTCTCTCCTTATGCTATTCTAGGAAACAAGGATCTATGTAGTGACAATTCCCTTTACCAAATCCAACTTCAAATACAACCTTGTCCAGCTCCAAAGAACAAATTAATGCATCGTCTAGTCATACTCCTTCCTATCCTCACTTTTCTAATTGTTGCCATCTTCCTACTTTGCTATCTAAAACTACGAACCAGTGCCATCAAGAACAAACACGCAGCTACATTGGCAACTAAGAATGGGGATTTGTTTTCGATATGGAATTACGATGGAAGCATAGCATACGAAGACATCATAAGAGTAACCCAAGACTTTGACATTAAGTATTGCATTGGGACAGGTGCATATGGGAGTGTCTACAAGGCACAATTACCCAGTGGTAACGTTGTCGCCTTGAAAAAACTTCACGGCTTTGAAGCAGAGGTGCCTGCTTTGGATGAGAGTTTTAGAAACGAAGTGAGAGTGTTATCAGAAATAAAGCATCGAAATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGGATCATGTTTTTGATCTATCAGTATATGGAGAGAGGAAGCTTGTTTTCTGTCTTGTATGATGATCAGGAAGCAGTGGAATTGGATTGGAGAAAGAGGATTAAAATTGTGAAAGGCATTGCACATGCTCTGTCATATCTTCATCATGACTGCACCCCTACAATAGTGCATAGAGACATATCGAGTAGCAATATCTTGCTTAACTCAGAGTGGGAGCCAAGTGTTTCTGACTTCGGCACAGCTCGACTCCTCAGCAATGATTCATCCAACAGAACTATCGTTGCTGGAACTATTGGATATATAGCTCCAGAGCTTGCCTATTCAATGGTTGTGAGTGAAAAGTGTGATGTGTATAGCTTTGGAGTAGTGGCACTTGAAACGTTGGTGGGAAGGCATCCTAAGGAAATATTGTCTTCGCTTCAATCAGCATCGACTAATGGCATAACATTACGTGAAGTATTAGACCAACGCCTTTCACAGCCAACAATGTCAGTTTCACTAGACATAGTTCGTGTAGCCATAGTGGCATTTGCATGCTTAAATCCCGATCCTTGCTCACGTCCAACAATGAAATGCGTCTCTCAATGCTTTCTTACTCAGCTTACACCATTAAACATTCCTTTGCGTGAAATTTCATTGCAGCAGCTCATGAGTCAAGTGTTCAGGCATTATTTAAAATTGTGA | 2073 | 0.4018 | FLTLWPFLIQLEAASLASHHRLEANALLKSGWWNQSQLDSYNVCEWDGLVCNDAGSITRITYPYFITSGIRLATLNLSAFKNLERLDFRRSGLEGTIPPQIGNLPKLTYLDMSYNHLEGEIPHSLANLTQLETLMISNNYFNGTFPLSLLNLTKLEYLDISNNQLHGSLPSNLHQLTKLRELLLNDNSFIGTLPFSLTNLSQLACLDISNNQLRGSLPSTFHQLTNMRELRLDNNSISGNLEPLAALSNLPIISVIELSFNQITGEIPPNLAYLPRLNISYNYLKGPIPDGLSPYAILGNKDLCSDNSLYQIQLQIQPCPAPKNKLMHRLVILLPILTFLIVAIFLLCYLKLRTSAIKNKHAATLATKNGDLFSIWNYDGSIAYEDIIRVTQDFDIKYCIGTGAYGSVYKAQLPSGNVVALKKLHGFEAEVPALDESFRNEVRVLSEIKHRNIVKLYGFCLHKRIMFLIYQYMERGSLFSVLYDDQEAVELDWRKRIKIVKGIAHALSYLHHDCTPTIVHRDISSSNILLNSEWEPSVSDFGTARLLSNDSSNRTIVAGTIGYIAPELAYSMVVSEKCDVYSFGVVALETLVGRHPKEILSSLQSASTNGITLREVLDQRLSQPTMSVSLDIVRVAIVAFACLNPDPCSRPTMKCVSQCFLTQLTPLNIPLREISLQQLMSQVFRHYLKL* | 691 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g2437 | 690 | ProSiteProfiles | Protein kinase domain profile. | 394 | 661 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2437 | 690 | Pfam | Protein kinase domain | 398 | 656 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2437 | 690 | Pfam | Leucine Rich Repeat | 154 | 174 | IPR001611 | GO:0005515 | |
Apr4g2437 | 690 | SUPERFAMILY | L domain-like | 34 | 303 | - | - | |
Apr4g2437 | 690 | PRINTS | Leucine-rich repeat signature | 107 | 120 | - | - | |
Apr4g2437 | 690 | PRINTS | Leucine-rich repeat signature | 152 | 165 | - | - | |
Apr4g2437 | 690 | Gene3D | Ribonuclease Inhibitor | 10 | 309 | IPR032675 | - | |
Apr4g2437 | 690 | SMART | LRR_typ_2 | 104 | 128 | IPR003591 | - | |
Apr4g2437 | 690 | SMART | LRR_typ_2 | 200 | 223 | IPR003591 | - | |
Apr4g2437 | 690 | SMART | LRR_typ_2 | 224 | 248 | IPR003591 | - | |
Apr4g2437 | 690 | SMART | LRR_typ_2 | 152 | 176 | IPR003591 | - | |
Apr4g2437 | 690 | SUPERFAMILY | Protein kinase-like (PK-like) | 378 | 659 | IPR011009 | - | |
Apr4g2437 | 690 | Pfam | Leucine rich repeat | 82 | 140 | IPR001611 | GO:0005515 | |
Apr4g2437 | 690 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 518 | 530 | IPR008266 | GO:0004672|GO:0006468 | |
Apr4g2437 | 690 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 18 | 123 | - | - | |
Apr4g2437 | 690 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 112 | 685 | - | - | |
Apr4g2437 | 690 | ProSitePatterns | Protein kinases ATP-binding region signature. | 400 | 422 | IPR017441 | GO:0005524 | |
Apr4g2437 | 690 | Gene3D | Phosphorylase Kinase; domain 1 | 355 | 472 | - | - | |
Apr4g2437 | 690 | Gene3D | Transferase(Phosphotransferase) domain 1 | 473 | 666 | - | - | |
Apr4g2437 | 690 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 112 | 685 | - | - | |
Apr4g2437 | 690 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 18 | 123 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g2437 | Apr-Chr4 | 33289556 | 33296883 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g2437 | 93 | 566 | Receptor kinase-like Gene Family | AT4G08850 | 42.510 | 1.40e-120 | 382 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Apr4g2437 | Pkinase | 1.1e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g2437 | - | - | gmx:100778268 | 815.839 |