Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2437 TTCTTGACACTTTGGCCTTTTTTGATACAGTTAGAAGCAGCGTCTTTAGCATCGCATCATCGATTGGAAGCAAATGCTCTACTCAAGAGTGGGTGGTGGAATCAATCGCAGTTAGATTCATACAATGTATGTGAGTGGGATGGTTTAGTTTGCAACGATGCTGGAAGCATAACTCGAATCACTTATCCGTACTTTATTACATCAGGGATTCGATTGGCAACACTGAACCTGTCAGCTTTCAAGAATTTAGAAAGATTAGACTTTCGAAGAAGTGGACTTGAAGGGACTATCCCACCCCAAATTGGTAATCTCCCCAAACTCACTTATCTCGATATGTCCTACAATCATCTTGAAGGTGAGATTCCTCATTCACTAGCAAATCTTACCCAATTAGAGACCCTAATGATATCTAACAACTACTTCAATGGCACCTTCCCTCTTTCACTCCTAAACCTTACCAAATTGGAATACCTTGACATTTCCAACAATCAACTCCATGGTTCCCTCCCTTCTAATTTACATCAATTAACAAAATTGCGAGAGCTACTGTTAAATGACAACTCCTTCATTGGAACTTTGCCTTTTTCACTTACAAATCTCTCCCAATTGGCATGCCTTGACATTTCCAACAATCAACTTCGTGGTTCCCTCCCTTCTACTTTTCATCAATTAACAAACATGCGAGAGTTGCGGCTAGATAATAACTCAATTAGTGGAAACTTAGAACCCTTGGCAGCTTTAAGCAATCTTCCAATTATAAGCGTTATCGAACTCAGTTTCAACCAAATTACTGGTGAAATACCTCCAAACCTTGCATATTTACCAAGATTGAACATTTCCTACAATTATTTGAAGGGTCCCATTCCTGATGGTCTCTCTCCTTATGCTATTCTAGGAAACAAGGATCTATGTAGTGACAATTCCCTTTACCAAATCCAACTTCAAATACAACCTTGTCCAGCTCCAAAGAACAAATTAATGCATCGTCTAGTCATACTCCTTCCTATCCTCACTTTTCTAATTGTTGCCATCTTCCTACTTTGCTATCTAAAACTACGAACCAGTGCCATCAAGAACAAACACGCAGCTACATTGGCAACTAAGAATGGGGATTTGTTTTCGATATGGAATTACGATGGAAGCATAGCATACGAAGACATCATAAGAGTAACCCAAGACTTTGACATTAAGTATTGCATTGGGACAGGTGCATATGGGAGTGTCTACAAGGCACAATTACCCAGTGGTAACGTTGTCGCCTTGAAAAAACTTCACGGCTTTGAAGCAGAGGTGCCTGCTTTGGATGAGAGTTTTAGAAACGAAGTGAGAGTGTTATCAGAAATAAAGCATCGAAATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGGATCATGTTTTTGATCTATCAGTATATGGAGAGAGGAAGCTTGTTTTCTGTCTTGTATGATGATCAGGAAGCAGTGGAATTGGATTGGAGAAAGAGGATTAAAATTGTGAAAGGCATTGCACATGCTCTGTCATATCTTCATCATGACTGCACCCCTACAATAGTGCATAGAGACATATCGAGTAGCAATATCTTGCTTAACTCAGAGTGGGAGCCAAGTGTTTCTGACTTCGGCACAGCTCGACTCCTCAGCAATGATTCATCCAACAGAACTATCGTTGCTGGAACTATTGGATATATAGCTCCAGAGCTTGCCTATTCAATGGTTGTGAGTGAAAAGTGTGATGTGTATAGCTTTGGAGTAGTGGCACTTGAAACGTTGGTGGGAAGGCATCCTAAGGAAATATTGTCTTCGCTTCAATCAGCATCGACTAATGGCATAACATTACGTGAAGTATTAGACCAACGCCTTTCACAGCCAACAATGTCAGTTTCACTAGACATAGTTCGTGTAGCCATAGTGGCATTTGCATGCTTAAATCCCGATCCTTGCTCACGTCCAACAATGAAATGCGTCTCTCAATGCTTTCTTACTCAGCTTACACCATTAAACATTCCTTTGCGTGAAATTTCATTGCAGCAGCTCATGAGTCAAGTGTTCAGGCATTATTTAAAATTGTGA 2073 0.4018 FLTLWPFLIQLEAASLASHHRLEANALLKSGWWNQSQLDSYNVCEWDGLVCNDAGSITRITYPYFITSGIRLATLNLSAFKNLERLDFRRSGLEGTIPPQIGNLPKLTYLDMSYNHLEGEIPHSLANLTQLETLMISNNYFNGTFPLSLLNLTKLEYLDISNNQLHGSLPSNLHQLTKLRELLLNDNSFIGTLPFSLTNLSQLACLDISNNQLRGSLPSTFHQLTNMRELRLDNNSISGNLEPLAALSNLPIISVIELSFNQITGEIPPNLAYLPRLNISYNYLKGPIPDGLSPYAILGNKDLCSDNSLYQIQLQIQPCPAPKNKLMHRLVILLPILTFLIVAIFLLCYLKLRTSAIKNKHAATLATKNGDLFSIWNYDGSIAYEDIIRVTQDFDIKYCIGTGAYGSVYKAQLPSGNVVALKKLHGFEAEVPALDESFRNEVRVLSEIKHRNIVKLYGFCLHKRIMFLIYQYMERGSLFSVLYDDQEAVELDWRKRIKIVKGIAHALSYLHHDCTPTIVHRDISSSNILLNSEWEPSVSDFGTARLLSNDSSNRTIVAGTIGYIAPELAYSMVVSEKCDVYSFGVVALETLVGRHPKEILSSLQSASTNGITLREVLDQRLSQPTMSVSLDIVRVAIVAFACLNPDPCSRPTMKCVSQCFLTQLTPLNIPLREISLQQLMSQVFRHYLKL* 691
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2437 690 ProSiteProfiles Protein kinase domain profile. 394 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2437 690 Pfam Protein kinase domain 398 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2437 690 Pfam Leucine Rich Repeat 154 174 IPR001611 GO:0005515
Apr4g2437 690 SUPERFAMILY L domain-like 34 303 - -
Apr4g2437 690 PRINTS Leucine-rich repeat signature 107 120 - -
Apr4g2437 690 PRINTS Leucine-rich repeat signature 152 165 - -
Apr4g2437 690 Gene3D Ribonuclease Inhibitor 10 309 IPR032675 -
Apr4g2437 690 SMART LRR_typ_2 104 128 IPR003591 -
Apr4g2437 690 SMART LRR_typ_2 200 223 IPR003591 -
Apr4g2437 690 SMART LRR_typ_2 224 248 IPR003591 -
Apr4g2437 690 SMART LRR_typ_2 152 176 IPR003591 -
Apr4g2437 690 SUPERFAMILY Protein kinase-like (PK-like) 378 659 IPR011009 -
Apr4g2437 690 Pfam Leucine rich repeat 82 140 IPR001611 GO:0005515
Apr4g2437 690 ProSitePatterns Tyrosine protein kinases specific active-site signature. 518 530 IPR008266 GO:0004672|GO:0006468
Apr4g2437 690 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 18 123 - -
Apr4g2437 690 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 112 685 - -
Apr4g2437 690 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Apr4g2437 690 Gene3D Phosphorylase Kinase; domain 1 355 472 - -
Apr4g2437 690 Gene3D Transferase(Phosphotransferase) domain 1 473 666 - -
Apr4g2437 690 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 112 685 - -
Apr4g2437 690 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 123 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr4g2437 Apr-Chr4 33289556 33296883 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2437 93 566 Receptor kinase-like Gene Family AT4G08850 42.510 1.40e-120 382
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr4g2437 Pkinase 1.1e-43 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2437 - - gmx:100778268 815.839