Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2435 ATGCTTTACGTTGAAGTTGAGGATCAACCTTATATACATCAAATTAAAACATCTTTTGTCATACTCCTAGTCATGGCATTGCCAATTCCCAATTATACGATGGTAGGAACTTGGTACAATGTACTTGTTATCTCTTGGACTTGTTTAAGCATTGTAATTGTGTCAGATGCAGCATCTGAATCATCACCACTAGACATAGAAGCACAAGCTCTGATTGAAAGTGAGTGGTGGAGTGATTACACAAACCATGTTCCTAGTCGTTGCCAATGGCCAGGCATTACATGCAACAATGCTGGAAGTATCACAAACATTTCTTTGCCAGCAGAAGTTCAATTGGGAAACAAGTTTTGGAGATTCAACTTCTCTTGTTTCCCAAACCTTGTCCACATCAACCTTGCTTCACATGGAATCGCTGGGAGTATTCCACATGGACTAGGTACACTTTCCAAACTCACTCACCTTGACCTATCTTCTAATGATATAGAGGGGCCTATACCATTAAACATTTGGAATCTAAGTAATTTGGTGACCCTGAATTTGTCTAGAAACAAGCTTAATGGTTCAATTCCACCTTCTGTGGGGCAGTTGACTAAGCTGAACTCTATGTTTCTTGATAGCAATTTGATTGTTGGGTATGTCCCTTTAGAGTTAGGAAGGCTGAGGAATCTGACTCAATTGAGTTTAAGTTATAATTGTTTCATTGGTCCAATACCTGTGGAGATTGGTCTATTGAAGAAATTGAAATATTTGTGTCTTAGTATGAACAAGTTGAATGGTTCTATACCTTTAGAAATAGGGGAATTGAACAACCTTTTGATTCTTGATCTTAGCACTAACAATCTCACTGGTGAAGTAGCCTCAGTTTTGGATAAGTTAACCAATTTGACTGAACTAAACTTGTCCAACAATGAGATTTCTGGAATGTTACCAATTGATACTACCCAATTGAGCCAACTGAAGTATCTGAATATTTCAGATAACAAAATTTTTGGTTCAATACCTCAAGGCATTGGAAAACTGTCCAAACTCTTAGTCCTAGACCTGTCAGGAAACATGTTGAGTGGAGAAATTCCAGCCAGTCTTGCAAATTGCTCTAACCTTCAGGTGTTGGCTTTGAGCCATAACAATATAACTGGCACCATTCCCTCTCATGTTGGAGATCTTGCTACACTAGCTTTAATTGATTTGAGTCATAATTCAATCATAGGAGAGATACCCCATCAGCTTGGGAATGTGAAATACATAAGGACCTTGGATCTCAGTTATAATGAACTCAGTGGAAGCATTCCCAATTCCCTAGCATTATTGAGGAAGATAAACTTGTCCCATAATTCTCTAGAGGATGAGATCCCAGATGATCTCCAAGATTCTTTTCCACCAGATGCATTCAGTGGCAATGAGTATTTATGTGGCAACAACACCCCCTTCCGCAGTTGTTATTCTCCTAGCAGAACAAATAATATATTCTGGACCCACATGAAGATTTTCCTTCCGCTCACAGCTTTTCTTGCTCTTATTTGTTTTGTGTATGTGCTCCTCTGCTGGTGTAAGGTTGGTAGTTGCAATTGCAAGTCTGAAGCCGAAGAAACAAAGAATGGTGACATGTTTTCAATATGGAACTATGATGGTAAAATTGCATATAAAGATATCATTAAAGCAACAGAAGGTTTTGACATCAAATATTGCATAGGGGCTGGTGGTTGTGGTAGTGTCTACAAAGCACAACTACCTAGAGGTAGAGTAGTGGCCTTGAAGAAACTCCACATTTTAGAAGCCAACCAGTCAGCAATCCAGAAGATTTTCAAGAATGAAGTGAGAATGTTGACAAAGATAAGGCATAGAAATATTTTGAAGCTTTATGGATTCTGCTTGCACAATAGGTGCATGTTTCTGGTTCTAGAATACATGGAAAGGGGAAGCTTATATTGTGTGTTGCACAATGACATTGAAGCTAAGGAGTTGGGTTGGACCAAGAGGGTGAACATTGTGAAAGGCATAGCGCATAGCTTGTCATACCTTCACTACGATTGCAAGCCAGCAATTATTCATAGAGATGTAACAACCAAAAATGTTCTCTTGAATATACGAATGGAGGCTTGTCTCTCTGATTTTGGCATAGCCAGACTCCTAAACTCTAGCTCCTCCAATAGAACACTACTTGCTGGCACTTATGGATACATTGCACCAGGTGAGGTTTTGTTATATGATGGCTGCTTCAGTTTCCCTTATTCTCAAAAGGGTGTGTTTTTTCTTACTAGGTTGGTTTTGCTTTTTGATGCAGAACTTGCCTATTGTGATTGTGTGACTGAGAAATGTGATGTCTTCAGCTTTGGAGTGGTTGCTCTTGAAATTGTCATGGGAAAGCATCCTGGAGAACTTGTTTCCTCATTAACATCTGAATCTACTCAAGAAATTCTCCTTAAAGATATATTAGATCCAAGACTAATATCCACCATCAATCAACAATCTGCTCAGAGTTTAGTTCTCATAGCAACACTAGCCTTTGCTTGTCTTCATTCTCAACCAAAGTTTAGACCAACAATGCAAGTAGTGTGTGACATCCTTGTCACCGGAAAGCCCCGATTAACCAAACCATTTGAAGAAATTTCACTAAGGCAGATAGTAGATCGGGAATTGTAA 2640 0.3902 MLYVEVEDQPYIHQIKTSFVILLVMALPIPNYTMVGTWYNVLVISWTCLSIVIVSDAASESSPLDIEAQALIESEWWSDYTNHVPSRCQWPGITCNNAGSITNISLPAEVQLGNKFWRFNFSCFPNLVHINLASHGIAGSIPHGLGTLSKLTHLDLSSNDIEGPIPLNIWNLSNLVTLNLSRNKLNGSIPPSVGQLTKLNSMFLDSNLIVGYVPLELGRLRNLTQLSLSYNCFIGPIPVEIGLLKKLKYLCLSMNKLNGSIPLEIGELNNLLILDLSTNNLTGEVASVLDKLTNLTELNLSNNEISGMLPIDTTQLSQLKYLNISDNKIFGSIPQGIGKLSKLLVLDLSGNMLSGEIPASLANCSNLQVLALSHNNITGTIPSHVGDLATLALIDLSHNSIIGEIPHQLGNVKYIRTLDLSYNELSGSIPNSLALLRKINLSHNSLEDEIPDDLQDSFPPDAFSGNEYLCGNNTPFRSCYSPSRTNNIFWTHMKIFLPLTAFLALICFVYVLLCWCKVGSCNCKSEAEETKNGDMFSIWNYDGKIAYKDIIKATEGFDIKYCIGAGGCGSVYKAQLPRGRVVALKKLHILEANQSAIQKIFKNEVRMLTKIRHRNILKLYGFCLHNRCMFLVLEYMERGSLYCVLHNDIEAKELGWTKRVNIVKGIAHSLSYLHYDCKPAIIHRDVTTKNVLLNIRMEACLSDFGIARLLNSSSSNRTLLAGTYGYIAPGEVLLYDGCFSFPYSQKGVFFLTRLVLLFDAELAYCDCVTEKCDVFSFGVVALEIVMGKHPGELVSSLTSESTQEILLKDILDPRLISTINQQSAQSLVLIATLAFACLHSQPKFRPTMQVVCDILVTGKPRLTKPFEEISLRQIVDREL* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2435 879 ProSiteProfiles Protein kinase domain profile. 557 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2435 879 Pfam Protein kinase domain 561 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2435 879 Gene3D Ribonuclease Inhibitor 219 289 IPR032675 -
Apr4g2435 879 Gene3D Transferase(Phosphotransferase) domain 1 636 865 - -
Apr4g2435 879 ProSitePatterns Tyrosine protein kinases specific active-site signature. 681 693 IPR008266 GO:0004672|GO:0006468
Apr4g2435 879 SMART LRR_typ_2 220 244 IPR003591 -
Apr4g2435 879 SMART LRR_typ_2 433 465 IPR003591 -
Apr4g2435 879 SMART LRR_typ_2 340 364 IPR003591 -
Apr4g2435 879 SMART LRR_typ_2 365 388 IPR003591 -
Apr4g2435 879 SMART LRR_typ_2 292 316 IPR003591 -
Apr4g2435 879 SMART LRR_typ_2 268 291 IPR003591 -
Apr4g2435 879 SMART LRR_typ_2 172 196 IPR003591 -
Apr4g2435 879 SMART LRR_typ_2 148 171 IPR003591 -
Apr4g2435 879 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 67 874 - -
Apr4g2435 879 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 67 874 - -
Apr4g2435 879 SUPERFAMILY Protein kinase-like (PK-like) 537 855 IPR011009 -
Apr4g2435 879 Gene3D Ribonuclease Inhibitor 64 216 IPR032675 -
Apr4g2435 879 SMART LRR_sd22_2 340 366 - -
Apr4g2435 879 SMART LRR_sd22_2 244 265 - -
Apr4g2435 879 SMART LRR_sd22_2 316 339 - -
Apr4g2435 879 SMART LRR_sd22_2 148 174 - -
Apr4g2435 879 SMART LRR_sd22_2 292 313 - -
Apr4g2435 879 SMART LRR_sd22_2 388 407 - -
Apr4g2435 879 ProSiteProfiles Leucine-rich repeat profile. 294 315 IPR001611 GO:0005515
Apr4g2435 879 Gene3D Ribonuclease Inhibitor 290 487 IPR032675 -
Apr4g2435 879 SUPERFAMILY RNI-like 129 475 - -
Apr4g2435 879 Gene3D Phosphorylase Kinase; domain 1 518 635 - -
Apr4g2435 879 Pfam Leucine rich repeat 317 377 IPR001611 GO:0005515
Apr4g2435 879 Pfam Leucine Rich Repeat 436 455 IPR001611 GO:0005515
Apr4g2435 879 Pfam Leucine Rich Repeat 416 433 IPR001611 GO:0005515
Apr4g2435 879 PRINTS Leucine-rich repeat signature 271 284 - -
Apr4g2435 879 PRINTS Leucine-rich repeat signature 292 305 - -
Apr4g2435 879 Pfam Leucine Rich repeat 149 163 IPR001611 GO:0005515
Apr4g2435 879 Pfam Leucine Rich repeat 292 306 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2435 Apr-Chr4 33271270 33274503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2435 127 733 Receptor kinase-like Gene Family AT4G08850 39.550 1.63e-136 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr4g2435 Pkinase 3.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2435 - - aprc:113863342 1745.33