Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2426 ATGGGTTATCTTAGCAAAGCTTCTAAGACACTGAGGCAATCAAATTATCTGTCTTTGTTGCGCAATTTCAATTCCAATTTCAATCCATTAATCAACAGAATAACCCATCAACGCCATGCACTGTTCTGTTCCCAGTCACGCCAAAACAGCTCCAAAGAGAAAAGCACCATAGATTTGAATCAGTATCCCCCAGAACTCGTCAGAAACTTCTCAATAATTGCACATGTAGATCATGGAAAGTCCACTCTCGCTGATCGCCTTCTAGAACTCACTGGAACCATTAAGAAAGGCCATGGCCAGCCTCAGTATCTTGATAAATTGCAGGTGGAGAGGGAAAGGGGAATCACGGTTAAAGCACAGACAGCAACAATGTTCTATAAGCACAACATAGATGGTGGTGATGGAAAGGAGTCACCTAATTTTTTGTTGAATCTTATTGACACTCCTGGACATGTGGATTTTAGTTATGAAGTGTCAAGGTCACTAGCAGCGTGTCAGGGTGTGCTTTTGGTTGTTGATGCTGCTCAAGGAGTCCAAGCACAAACTGTTGCTAACTTTTACCTTGCCTTTGAGTCTAACCTAACAATTGTACCTGTTATCAACAAGATTGACCAGCCCACTGCTGATCCTGATCGTGTTAAAGCCCAATTGAAGTCGATGTTTGATCTTGACCCAAGTGATGCATTGTTGACATCTGCTAAAACTGGGCAGGGTCTTGAGAAAGTCCTTCCAGCAGTCATAGAGCGCATAGCTCCCCCTCCTGGGAGGAGCAGTTCTCCACTACGCATGCTTTTACTTGATTCATATTATGATGAATACAAAGGGGTAATATGCCATGTTGCCATTGTTGATGGTGTCTTGCGCAAGGGGGATAAGATTTCTTCTGCTGCTACTGGTCAGTCATATGAAGCTTTGGATATAGGCATCATGCATCCTGAACTTACTCCTACTGGAATCTTGCTTACCGGACAAGTTGGTTATGTTGTAAGTGGCATGCGGTCCACCAAAGAAGCTCGTGTTGGTGATACAATTTACCATACACGGAGTGCTGTAGAGCCTCTTCCAGGCTTCAAGCCAGCAAAACATATGGTGTTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCGCTAAACCATGCAATAGAGAGGCTGATGTGCAATGATGCCAGTGTTTCTATTACTAAAGAAACTAGCACTGCTCTTGGTCTGGGGTTCAGGTGTGGATTTTTAGGCCTTTTGCACATGGACGTTTTTCATCAACGGCTAGAACAGGAGTATGGAGCTCATGTAATCTCAACTGTTCCTACTGTGCCTTATATATTCGAATATTCTGATGGAAGCAAGTTAGAAGTTCAGAATCCTGCTTCATTACCCTCTAACCCCAAGCAACGAGTGACGGCTTGTTGGGAACCTACAGTAATAGCTACTATAATCATTCCTAGTGAGTATGTGGGACCTGTTATTACCCTTGTCTCTGAGCGTAGGGGTCAGCAGTTGGAGCACTCATTCATTGACAGTCAACGGGTATTCATGAAGTACCGCATGCCTTTGAGGGAAATTGTCGTTGACTTTTATAATGAATTGAAGAGTATAACATCGGGCTATGCGTCGTTTGATTATGAGGACTCAGATTATCAGCTAGCTGATCTGGTGAAACTTGATGTTCTCTTGAATGGACAACCAGTTGATGCAATGGCAACCATTGTTCATAACATGAAAGCATACCGTGTTGGGCGTGAGTTGACAGAGAAATTGAAGAAAGTCATAGACAGGCAAATGTTTGAGATAACCATACAAGCTGCCATTGGGTCAAAAGTCATAGCAAGGGAGACGATTTCTGCTTTGAGGAAAAATGTGCTTGCCAAGTGTTATGGCGGTGATGTTACTCGAAAAAGGAAACTGTTGGAGAAGCAAAAGGAAGGAAAGAAGCGAATGAAACGTGTTGGTTCTGTTGATATACCCCAAGAAGCATTTCATGAACTATTGAAGGTTTCTTAG 2004 0.4301 MGYLSKASKTLRQSNYLSLLRNFNSNFNPLINRITHQRHALFCSQSRQNSSKEKSTIDLNQYPPELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHNIDGGDGKESPNFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPSDALLTSAKTGQGLEKVLPAVIERIAPPPGRSSSPLRMLLLDSYYDEYKGVICHVAIVDGVLRKGDKISSAATGQSYEALDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHTRSAVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLMCNDASVSITKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLEVQNPASLPSNPKQRVTACWEPTVIATIIIPSEYVGPVITLVSERRGQQLEHSFIDSQRVFMKYRMPLREIVVDFYNELKSITSGYASFDYEDSDYQLADLVKLDVLLNGQPVDAMATIVHNMKAYRVGRELTEKLKKVIDRQMFEITIQAAIGSKVIARETISALRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2426 667 Gene3D Translation factors 257 354 - -
Apr4g2426 667 PANTHER TRANSLATION FACTOR GUF1-RELATED 53 665 IPR006297 GO:0005525
Apr4g2426 667 TIGRFAM lepA: elongation factor 4 67 666 IPR006297 GO:0005525
Apr4g2426 667 SUPERFAMILY EF-G C-terminal domain-like 363 440 IPR035647 -
Apr4g2426 667 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 53 665 - -
Apr4g2426 667 TIGRFAM small_GTP: small GTP-binding protein domain 71 242 IPR005225 GO:0005525
Apr4g2426 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 293 IPR027417 -
Apr4g2426 667 CDD EF4_II 261 346 - -
Apr4g2426 667 Pfam Elongation factor Tu GTP binding domain 67 250 IPR000795 GO:0003924|GO:0005525
Apr4g2426 667 Gene3D Elongation Factor G (Translational Gtpase), domain 3 355 436 - -
Apr4g2426 667 Pfam Elongation factor G C-terminus 472 556 IPR000640 -
Apr4g2426 667 CDD EF4_III 362 437 - -
Apr4g2426 667 SUPERFAMILY EF-G C-terminal domain-like 471 565 IPR035647 -
Apr4g2426 667 Gene3D - 551 625 IPR038363 -
Apr4g2426 667 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 65 254 IPR000795 GO:0003924|GO:0005525
Apr4g2426 667 Pfam GTP-binding protein LepA C-terminus 559 665 IPR013842 -
Apr4g2426 667 CDD LepA 68 253 - -
Apr4g2426 667 Hamap Elongation factor 4 [lepA]. 63 667 IPR006297 GO:0005525
Apr4g2426 667 CDD lepA_C 472 551 IPR035654 -
Apr4g2426 667 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 105 120 IPR031157 -
Apr4g2426 667 Gene3D - 437 549 - -
Apr4g2426 667 Gene3D - 65 255 IPR027417 -
Apr4g2426 667 PRINTS GTP-binding elongation factor signature 69 82 IPR000795 GO:0003924|GO:0005525
Apr4g2426 667 PRINTS GTP-binding elongation factor signature 112 120 IPR000795 GO:0003924|GO:0005525
Apr4g2426 667 PRINTS GTP-binding elongation factor signature 144 154 IPR000795 GO:0003924|GO:0005525
Apr4g2426 667 PRINTS GTP-binding elongation factor signature 196 205 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2426 Apr-Chr4 33225199 33230530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2426 67 205 Eukaryotic Initiation Factors Gene Family AT1G56070 41.497 4.64e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2426 K21594 - gmx:100781092 1200.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2426 4 33225199 33230530 Apr4g2426 4 33225199 33230530 ECH