Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2425 ATGCCAAAAAAGTCTAGTTCTAGTGGTTTAGCGATTGAAGAGAAGAGAGTTGCTTCCATTTGCAGTGAAGATGATTTGATTACTCAAGAGGTTAGAAAGGAAGATAAACTCAAAGATGCTAAAACTGAGATGGGTGAGGTGAAGGAAGAAAATGAGAGATTGAAGATGATGTTGGAGCGAGTAGAAAAGGACTACCACTCCCTTCAACTTCGTTTCTTTGACATCCTTAACAAAGAAGTTTCAAAAACGGGTGTGAATGATTCATCTGCTTCTCATGATGAAACTGAAGAACCTGAGTTTGTGTCACTTTGCCTTGGAAGAAGTCCAAAGGAGCCTAAGAAGGAAGTGAGAATTGGAAACTCAAACAAACCAAAAGAAAAAGATGTGGAAGCCAACCTTACTCTTGGATTAGACGCCAAACATGTGTTGTCAATGGACATGGGGATGGTGTCTGATTTGAGTCCCATGAACAGCTCAGAAGAACCAAAGGAATCAGAAGCTGAGGGAACATTGTCAACAGATAAATCAGCAAAATTGATAAATGTAAATAATGACATTTCAGATCAAATGCCTGCCAAGAGAGCCAGGGTATCCGTGAGAGCTAGGTGTGATACTCCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAAATATCGAAGGGAAATCCATGTCCAAGGGCATATTATCGTTGCACTGTTGCACCAACATGCCCAGTAAGGAAACGGGTGCAAAGATGTGCTGAGGACTTGTCCATCTTAATCACCACATATGAAGGAACACACAACCACCCACTTCCAGTTTCAGCCACAGCCATGGCTTCCACAACTTCTGCTGCTGCTTCCATGTTGTTGTCAGGTTCTTCAACATCTCACCCTACATGTCAAAGTTTTGCCTCTTTTGGAAATGCCCCTACTACACAATTCAATGGTCTAAATTTTAGTCAGCATTTTGGTGAATCAAGAGCCAAACAAGTCTTCTATCCACCAAACCATGCCTCATCACACTTGTTCCCAACAATCACTCTAGATCTTACTTCATCCTCCTCATTAACTCATGCTCATCACTTACCTTCAATTTCAAACCCAAGATTATTTTCACCAACTAGTCTCAACTTTTGTTCCTCAGAGCCTAACTTCATACCATCCAATTGGGGTAAAGGGTTCCCTAATAATGGCACTACCACTACACCAACTGACAAAATCCACACAAGGCAAGTTATCCAAGGAAACCATTTCCAGGAACACTTTTTTCAACAATGCATAACAAACCAAACTCCTTCCAAGGAAGCTTTGGCAGAAACAATAGCCCAAGCAATCAACACAGACCCAAGTCTTCGCTCAGTGATAACTGCTGCAGTTTCATCAATTGTGGGACAAGGATCAAACAGTGGAAACCAAGAAGGATTAGAGAAGGTTTTAGGTTCAGGTTTGAACTTAAAATTGGGGGAGAATCTGCAATTGGGTTCTCTCAATCCCTTGAACCAGAATGGAAAAGGGTGTTTGACTGATTACTTCAAAAGGTTGTCTTCTTCAAGTTCTGAGGCAGGAAATTTCATTTTTCTCCAACCACCATTGCCATTTTCTCTCTCCAAAAAGTAG 1608 0.4136 MPKKSSSSGLAIEEKRVASICSEDDLITQEVRKEDKLKDAKTEMGEVKEENERLKMMLERVEKDYHSLQLRFFDILNKEVSKTGVNDSSASHDETEEPEFVSLCLGRSPKEPKKEVRIGNSNKPKEKDVEANLTLGLDAKHVLSMDMGMVSDLSPMNSSEEPKESEAEGTLSTDKSAKLINVNNDISDQMPAKRARVSVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPTCPVRKRVQRCAEDLSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSHPTCQSFASFGNAPTTQFNGLNFSQHFGESRAKQVFYPPNHASSHLFPTITLDLTSSSSLTHAHHLPSISNPRLFSPTSLNFCSSEPNFIPSNWGKGFPNNGTTTTPTDKIHTRQVIQGNHFQEHFFQQCITNQTPSKEALAETIAQAINTDPSLRSVITAAVSSIVGQGSNSGNQEGLEKVLGSGLNLKLGENLQLGSLNPLNQNGKGCLTDYFKRLSSSSSEAGNFIFLQPPLPFSLSKK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2425 535 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 36 534 - -
Apr4g2425 535 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 36 534 IPR044810 GO:0003700
Apr4g2425 535 SMART WRKY_cls 208 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2425 535 Coils Coil 30 71 - -
Apr4g2425 535 Gene3D WRKY domain 193 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2425 535 ProSiteProfiles WRKY domain profile. 203 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2425 535 SUPERFAMILY WRKY DNA-binding domain 201 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2425 535 MobiDBLite consensus disorder prediction 151 177 - -
Apr4g2425 535 Pfam WRKY DNA -binding domain 209 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2425 Apr-Chr4 33220320 33223959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2425 44 520 WRKY Transcription Factor Family AT5G15130 38.627 2.08e-82 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g2425 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2425 - - gmx:100792084 702.975