Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2422 ATGTACGGATTCGAAGCTCTCACCTTCAACATCCACGGCGGTTACCTCGAGGCCATCGTTAGGGGCCACCGCGCGGGCCTTCTCACCACCGCCGATTACAACAATCTCTGCCAATGCGAAACCCTCGACGACATCAAGATGCACCTCTCCGCCACCGAGTATGGTCCTTACCTTCAAAACGAACCTTCTCCGTTGCATACCACCACGATTGTGGAGAAGTGTACTCTTAAGCTGGTTGATGATTACAAGAACATGCTATGCCAAGCCACAGAACCCTTGTCAACCTTTTTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTTTTGATTGTTACTGGAACCTTGCATGAAAGAGATGTTCAAGAACTGCTAGAAAAGTGCCATCCACTTGGCATGTTTGACAGTATTGCTACTCTGGCAGTTGCTCAGAATATGCGGGAGCTTTACAGGCTGGTTCTTGTTGACACTCCTCTGGCTCCATACTTTTCTGAGTGCATTACATCAGAGGACTTGGATGATATGAACATTGAAATAATGAGGAACACTCTTTACAAGGCATACCTTGAAGACTTTTACAGATTTTGTCAGATAATGTCTGACCTTCTAGCTTTTGAGGCCGATAGAAGGGCTGTGAATATTACCATAAACAGCATTGGTACTGAACTTACTAGAGATGACCGTAGGAAATTGTACTCTAATTTTGGTTTGCTCTACCCATATGGTCATGAGGAACTTGCTGTCTGTGAAGACATTGATCAGGTTCGTGCTGTTATGGAAAAATATCCCCCCTATCAATCTATTTTTGCAAAGTTATCATATGGAGAGAGCCAGATGCTTGACAAGGCATTCTATGAGGAGGAGGTGAAAAGGCTTTGCTTGGCGTTCGAGCAACAGTTTCATTATGCAGTGTTCTTCGCATACATGAGGTTAAGGGAACAGGAGATCAGGAACTTAATGTGGATTTCAGAATGTGTGGCTCAGAATCAGAAGTCCAGAGTTCATGACAGTGTTGTCTTCATATTTTAG 1032 0.438 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKNMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2422 343 PIRSF V-ATP_synth_D 4 342 IPR016727 GO:0033179|GO:0046961|GO:1902600
Apr4g2422 343 Gene3D - 91 195 IPR035067 -
Apr4g2422 343 SUPERFAMILY V-type ATP synthase subunit C 14 341 IPR036079 -
Apr4g2422 343 Pfam ATP synthase (C/AC39) subunit 16 336 IPR002843 GO:0046961
Apr4g2422 343 PANTHER V-TYPE PROTON ATPASE SUBUNIT 1 343 - -
Apr4g2422 343 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 343 IPR016727 GO:0033179|GO:0046961|GO:1902600
Apr4g2422 343 Gene3D - 198 301 IPR035067 -
Apr4g2422 343 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 327 IPR044911 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2422 1 343 Primary Pumps ATPases(2) AT3G28715 93.878 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2422 K02146 - gmx:100780773 690.263