Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2393 ATGGAGAGGGTTGCGGAGCCAAAGGTACTTCCTCGGTCCTTACCTGTTCTTGTTGAGGTATCTAATGCACACACAGCTGCAATAAGAGAGGCAGGTCAGAAACTAAATGGGCATGATGTTTCAAGTGTGCGTGGAATTTCAGTGAGAGAAGTGAATCAGTTTTCTAAAGCACGGGATGGTCCGATGACACGTTTGGCTTCCATCAGAGAAGTGGCTCAATTATCAAATGCGCGTATAGTTTTGGTAAGGGAAGATATGGGATTCGATACACGATCCTCTCAAGAACCAGTCTCCCCTGTGCCTACAAGAACATGGAAAGGAAAGGGCTCTTTACCAGAACCTGAAGATCTTATGCCTGATATTGAGACATTGAAGGGCAGCAATGATCCTTTAGGGGAAACTGGTCCAAGTTCGTTTGCCGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTACCAATTGGTCAAAGCAAATCTGAGGCCGGATGCTTAATGAAGAGCATGTCCTTGAAGGGTCCTTTCTTAGATGATCTTTCAATTCGTGTTCCAACTAAGAAACCAAGCCTAGCTGTTGTTTCTCCTACGGAAAGTCTTGTTGAAGAATCAAATGACATGGTTAACTCATCCTCACCATTTTCTGGTGCTCGTGCGTCACAGAATATGGAGAACTCTCCCCTTGCCCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTCAGTCCTCATAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATATCGGAGTGATGCAGTCACTAGTGATGGCATGCTTAGTTTAGACAGAAATTGTGATAGCACTAAAGGAAGTGTAAGGGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATTAGATTACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGTTGTGGTGACATTGGAAGTGTATATCTCTCAGAACTGAGTGCAACACGGTGTTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGAGCACAGACAGAAAGAGAGATATTGCAGTTGCTGGACCATCCATTTCTACCTACGTTGTATACTCATTTTGAGACTGACAGATTCTCCTGTTTGGTAATGGAATACTGTCCTGGGGGTGACCTACACACTTTAAGACAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTCTATGCTGCTGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATAGAGACCTTAAACCTGAAAATGTATTGGTCCGAGATGATGGTCATATAATGCTCTCAGACTTTGATCTTTCACTCAGATGTGCTGTTTCACCTACCCTTATTAGATCTTTCGACGGCGACCCCTCGAAACGTGCTGGTGGCGCATTCTGTGTTCAACCTGCTTGTATTGAACCTTCATCAGTATGCATCCAGCCTTCATGTTTCATGCCTCGGCTCTTTGCTCCGAAAAATAAGAAATCGCGAAAGCCTAAAGCTGAACTTGGCCTGCCGTCCAGCACGCTTCCAGAGCTTGTTGCTGAACCAACAGCAGCTCGGTCTATGTCTTTTGTCGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGCCATGGAAGTGCAGTTGACTGGTGGACATTTGGAATATTCTTGCATGAGTTATTATATGGTAAAACTCCTTTCAAAGGATCTGGAAACCGTGCCACGCTTTTCAATGTAGTAGGTCAGCAGCTCAGGTTTCCCGAATCACCGGCCACGAGTTATGCCAGCCGTGATCTGATCCGAGGCTTGCTGGTGAAGGAGCCTCAGCACCGTCTCGGAGTGAAGAGAGGTGCAACTGAGATCAAACAGCACCCCTTCTTTGAAGGCGTGAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAATTCCAAGGCCAGTTGAAACCGAACCACCAGCTAAGTTTGAAGCAGTTGATACTATTGGTGTTAGCAACAACAGTAGTAAGAGAATGGTAGGTAATGACATGAAGTCTGGGGGTAATTATCTGGACTTTGAGTTCTTTTAG 2280 0.4513 MERVAEPKVLPRSLPVLVEVSNAHTAAIREAGQKLNGHDVSSVRGISVREVNQFSKARDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSSQEPVSPVPTRTWKGKGSLPEPEDLMPDIETLKGSNDPLGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQSKSEAGCLMKSMSLKGPFLDDLSIRVPTKKPSLAVVSPTESLVEESNDMVNSSSPFSGARASQNMENSPLAPDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRSFDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFAPKNKKSRKPKAELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEIPRPVETEPPAKFEAVDTIGVSNNSSKRMVGNDMKSGGNYLDFEFF* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2393 759 MobiDBLite consensus disorder prediction 290 343 - -
Apr4g2393 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Apr4g2393 759 CDD STKc_phototropin_like 364 717 - -
Apr4g2393 759 Gene3D Phosphorylase Kinase; domain 1 364 449 - -
Apr4g2393 759 Gene3D Transferase(Phosphotransferase) domain 1 450 517 - -
Apr4g2393 759 MobiDBLite consensus disorder prediction 207 241 - -
Apr4g2393 759 SMART serkin_6 366 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2393 759 Gene3D Transferase(Phosphotransferase) domain 1 594 716 - -
Apr4g2393 759 MobiDBLite consensus disorder prediction 207 233 - -
Apr4g2393 759 Pfam Protein kinase domain 367 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2393 759 Pfam Protein kinase domain 595 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2393 759 MobiDBLite consensus disorder prediction 90 148 - -
Apr4g2393 759 MobiDBLite consensus disorder prediction 291 339 - -
Apr4g2393 759 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 75 759 - -
Apr4g2393 759 ProSiteProfiles Protein kinase domain profile. 366 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2393 759 PANTHER FLIPPASE KINASE 1-RELATED 75 759 - -
Apr4g2393 759 SUPERFAMILY Protein kinase-like (PK-like) 347 723 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2393 Apr-Chr4 32897881 32902038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2393 1 759 AGC Kinase Gene Family AT2G44830 67.176 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr4g2393 Pkinase 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2393 - - gmx:100800019 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2393 4 32897881 32902038 Apr4g2393 4 32897881 32902038 ECH
Apr10g0494 10 11946090 11950435 Apr4g2393 4 32897881 32902038 PCT