Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2386 ATGTTTGAAAAAGGAAAGTCCATCAACATTCTAGTATGTTGTCGGATTCTCTTCATGTTACTTTGGATTCTTTTAACACCCAAAGTTGCTGGTTTTTCCAAAATCCTTTCTTCAGCTTCTGCTGCCTCCAATGTTAGTCTTCACTATCAAGCTGAAGCTAAAGATAATGAAGCAAATGCTTTGTTAAAGTGGAAACAAAGCCTTGACAACCAAACCCAAGCTTTGTTGCCAACTTGGGGAGGTACTATTAGCCCATGCAAATGGGAACGAATTCAGTGTGACAAATCCAAGTCTGTCTCTAGCATAAATCTTGCAAATTATGGACTCAAAGGTACCCTTCACTCTCTCAATTTCTCCTCATTTCCCAACCTCCTCAGCCTAAATATATACAATAACTTCTTTTATGGGACCATTCCTCCACAAATAGGCAACATGTCCAAAATTAATGAATTGAACTTGTCCTTAAATTCTTTTGATGGTAATATCCCAAAAGAAATGTGGACATTAAGGAGTCTTCGTAAGCTTGATCTTTCATTATGTCTACTAAGTGGAGAGATTCCTAATTCCATAGCAAACTTGTCCAACTTGTCATATCTTGATTTAGGTGGCAACAATTTTTCTAGTCACATTCCTCCACAGATTGGAAAATTGAACACTCTCACCTTTCTTGGTATTGGAGCTAGTAACCTTATTGGTTCTATTCCCAAGGAAATTGGAGAGTTGACAAACCTTCAATATATTGATTTGTCACGAAACTTTCTCTCTGGTACCATTCCTTCCGAAATTGGTAACATGAGCAGTTTGAATTCGCTTGGACTTTCAAATAACACTATTTCTGGGTCAATCCCATTTTCCATATGGAACATGACCAACTTAACGTTGCTATACCTTAATAGCAATAAACTTAATGATTCGTTGCATGCTTCCATAAAGAATTTGGTCAACTTGCAATTCCTTGCATTAAGTGATAACTTGCTTTTTGGATCCATTCCTTCCAGTATTGGAAACTTGACAAATCTCATTGAGTTGTACATGGATGCTAATCATTTTTCTGGATCAATTCCTCCCTCTTTAGGAAATTTGATCAATCTGAATCTTTTGAGTCTCCAAGAAAACAATCTTTTTGGATCAATCCCTACCACTTTTGGAAATTTAAAACGGCTCACCATCCTAGAATTGGCTACCAACAAACTTAGTGGTAGCATTCCACATTCCATAAATAACGTTACCAATTGGTATTCCTTGTTATTGGCTGACAATGATTTCATTGGCCATTTGCCACCTCAAATTTGCTCTGGTGGGTCACTTGCATTCTTTGCTACCTCTCACAACCATTTTACTGGTCCAGTACCAAAAACTTTGAAGAATTGCTCTAGTATTGCTAGACTCAGGCTTGGGGGAAACCAAATTGAAGGAGATATAGCACAAGATTTTGGTGTGTATCCAAATTTGAAACTTATTGATCTAAGTGACAATAAGTTTTACGGCCAAGTTTCAACAAATTGGGGGAAATGCTTCAATCTTGGTACCTTCAAGATATCCAACAATAATCTATCTGGTGGTATACCAATAGAACTTGCTGAGGCAACCAAGTTGGTTAGGCTTGACTTTTCTTCTAATCACTTGAATGGAAATATTCCAAAGGAACTTTTCCATTTGAAATCATTAGCTGAACTTGTGATCAGCAACAATGATCTTTCAGGAAACATTCCAATTGAACTTGGATTGTTGCAGAATCTGGAAGAATTGGATCTAGGAGGAAACAAGTTGAGTGGGACAATACCAACACAAGTTGTGGAGTTGCCCAAGTTAAGGAACTTGAATTTGAGCAAAAACAAAATCAAGGGAACCATTCCCTCTAATTTTAGAGAATTACAACCTCTTGAATCTCTTGATCTTAGTCAAAATTTTTTGAGTGGAATAATACCAACAGTGCTTGGAGAGTTGAAGAATTTGCAGTGGCTAAATCTTTCACACAACAATCTTTTTGGAACCATTCCATCCAGTTTTGGTGACACATCAAGTTTGATTTTTGTCAACATATCATATAACCAGTTGGAAGGTTCACTTCCAAAAAATCATGCTTTTCTTACTGCTTCAATCGAATCATTAAAAGGTAACAGAGGCTTGTGTGGTAACGTCACTGGCTTGGTTCTTTGTCCTACCAACCATAGTAAAAAAAGCCACAAGGTCATTCTACTAGTACTATTTGTTGCCATGGGTGCTCTAGTACTAGTATTTTGTGTGGTGGCAGTTTCAATGTATATTCTTTGTAGAAGTGCAAGAAAGGAAGAAATCCAAGCGAACGAAGCACAATCAGAAGAAGTGTTTTCTATATGGAGTCATGATGGAAAAATGATGTTTGAAAATATCATTGAAGCTACCAATAATTTCAATGACAAATATATCATTGGAATAGGGGGTCAAGGATCTGTTTACAAGGCTGAGTTACCTTCAGGTCAAGTTGTTGCAGTGAAAAAACTACATTTGGAAACAAATGAAGAGAAGCCAAATTTTAAAGCTTTTGAAACTGAAATTCGAGCTTTGACAGAAATCAGGCACCGTAACATTATAAAGCTATATGGTTTTTGCTCACATTCACGGTTCTCATTTTTGGTTTATAAGTTCTTGGAAGGGGGTAGCTTGGATCAAATACTAAGGAATGACACAAAAGCAATTGCATGTAATTGGGAAATGAGGGTGAATATTGTTAAAGGTGTGGCCAATGCTTTATCATACATGCATCATGATTGCTCACCTGCTATAATTCACCGTGACATATCAAGCAAGAATGTTCTTTTAGATTCACAATATATTGCTCATGTCTCTGATTTTGGAACAGCGAAGTTTTTGAAGCCTGGTTCACACATTTGGACCACGTTTGAAGGCACATTTGGGTATGCAGCTCCAGAGCTTGCCCAAACGATGGAAGTGACTGAGAAATGTGATGTCTTTAGTTTTGGCGTGCTTTCTTTAGAAATAATAATGGGAAAGCATCCAGGAGATCTCGTTTCTTCATTACTATCATCATCAACAGGAGCTTACAATTTGCTACTAAGTGATGTGTTCGATCAACGACCTGCTCAACCTCTAAAATCAATTGTTGGGGATGTCGTTTTGGTTTCAAAGTTGGCATTTTCTTGTTTGAGGGAAAATCCACATTCTCGCCCAACCATGGATCAAGTGTCTAAGGAGCTTATGAGGGGAAAATCACCTTTAACGGACCAATTTCCAATGATAAGACTAGGACAACTCCTCTAA 3261 0.3744 MFEKGKSINILVCCRILFMLLWILLTPKVAGFSKILSSASAASNVSLHYQAEAKDNEANALLKWKQSLDNQTQALLPTWGGTISPCKWERIQCDKSKSVSSINLANYGLKGTLHSLNFSSFPNLLSLNIYNNFFYGTIPPQIGNMSKINELNLSLNSFDGNIPKEMWTLRSLRKLDLSLCLLSGEIPNSIANLSNLSYLDLGGNNFSSHIPPQIGKLNTLTFLGIGASNLIGSIPKEIGELTNLQYIDLSRNFLSGTIPSEIGNMSSLNSLGLSNNTISGSIPFSIWNMTNLTLLYLNSNKLNDSLHASIKNLVNLQFLALSDNLLFGSIPSSIGNLTNLIELYMDANHFSGSIPPSLGNLINLNLLSLQENNLFGSIPTTFGNLKRLTILELATNKLSGSIPHSINNVTNWYSLLLADNDFIGHLPPQICSGGSLAFFATSHNHFTGPVPKTLKNCSSIARLRLGGNQIEGDIAQDFGVYPNLKLIDLSDNKFYGQVSTNWGKCFNLGTFKISNNNLSGGIPIELAEATKLVRLDFSSNHLNGNIPKELFHLKSLAELVISNNDLSGNIPIELGLLQNLEELDLGGNKLSGTIPTQVVELPKLRNLNLSKNKIKGTIPSNFRELQPLESLDLSQNFLSGIIPTVLGELKNLQWLNLSHNNLFGTIPSSFGDTSSLIFVNISYNQLEGSLPKNHAFLTASIESLKGNRGLCGNVTGLVLCPTNHSKKSHKVILLVLFVAMGALVLVFCVVAVSMYILCRSARKEEIQANEAQSEEVFSIWSHDGKMMFENIIEATNNFNDKYIIGIGGQGSVYKAELPSGQVVAVKKLHLETNEEKPNFKAFETEIRALTEIRHRNIIKLYGFCSHSRFSFLVYKFLEGGSLDQILRNDTKAIACNWEMRVNIVKGVANALSYMHHDCSPAIIHRDISSKNVLLDSQYIAHVSDFGTAKFLKPGSHIWTTFEGTFGYAAPELAQTMEVTEKCDVFSFGVLSLEIIMGKHPGDLVSSLLSSSTGAYNLLLSDVFDQRPAQPLKSIVGDVVLVSKLAFSCLRENPHSRPTMDQVSKELMRGKSPLTDQFPMIRLGQLL* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2386 1086 SUPERFAMILY Protein kinase-like (PK-like) 780 1066 IPR011009 -
Apr4g2386 1086 Gene3D Ribonuclease Inhibitor 385 721 IPR032675 -
Apr4g2386 1086 Gene3D Ribonuclease Inhibitor 53 209 IPR032675 -
Apr4g2386 1086 Gene3D Ribonuclease Inhibitor 210 309 IPR032675 -
Apr4g2386 1086 Pfam Leucine rich repeat 602 662 IPR001611 GO:0005515
Apr4g2386 1086 Pfam Leucine rich repeat 242 302 IPR001611 GO:0005515
Apr4g2386 1086 PRINTS Leucine-rich repeat signature 628 641 - -
Apr4g2386 1086 PRINTS Leucine-rich repeat signature 649 662 - -
Apr4g2386 1086 Pfam Leucine rich repeat N-terminal domain 55 94 IPR013210 -
Apr4g2386 1086 PANTHER LRR RECEPTOR-LIKE KINASE 270 1085 - -
Apr4g2386 1086 PANTHER LRR RECEPTOR-LIKE KINASE 193 283 - -
Apr4g2386 1086 PANTHER LRR RECEPTOR-LIKE KINASE 18 197 - -
Apr4g2386 1086 Gene3D Phosphorylase Kinase; domain 1 758 876 - -
Apr4g2386 1086 Pfam Leucine Rich Repeat 171 193 IPR001611 GO:0005515
Apr4g2386 1086 Gene3D Transferase(Phosphotransferase) domain 1 877 1076 - -
Apr4g2386 1086 ProSitePatterns Tyrosine protein kinases specific active-site signature. 922 934 IPR008266 GO:0004672|GO:0006468
Apr4g2386 1086 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 270 1085 - -
Apr4g2386 1086 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 193 283 - -
Apr4g2386 1086 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 197 - -
Apr4g2386 1086 SMART LRR_typ_2 625 648 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 530 553 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 193 217 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 601 624 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 385 409 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 649 672 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 577 598 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 289 312 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 313 337 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 241 265 IPR003591 -
Apr4g2386 1086 SMART LRR_typ_2 361 384 IPR003591 -
Apr4g2386 1086 Pfam Protein kinase domain 799 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2386 1086 ProSiteProfiles Protein kinase domain profile. 798 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2386 1086 SMART LRR_sd22_2 385 411 - -
Apr4g2386 1086 SMART LRR_sd22_2 241 267 - -
Apr4g2386 1086 SMART LRR_sd22_2 289 306 - -
Apr4g2386 1086 SMART LRR_sd22_2 625 651 - -
Apr4g2386 1086 SMART LRR_sd22_2 577 609 - -
Apr4g2386 1086 SMART LRR_sd22_2 313 339 - -
Apr4g2386 1086 Gene3D Ribonuclease Inhibitor 319 384 IPR032675 -
Apr4g2386 1086 SUPERFAMILY RNI-like 367 696 - -
Apr4g2386 1086 SUPERFAMILY RNI-like 101 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2386 Apr-Chr4 32781587 32785117 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2386 45 970 Receptor kinase-like Gene Family AT4G08850 43.876 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr4g2386 Pkinase 5.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2386 - - gmx:100815688 1459.51