Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2384 ATGGATCGCTCCCTTCGTCTTTCATCCTTTCTTATTCTCTCTCTGTTGCTGAATTTTGTTCATGCCAGCAAAAAGTGCTACATTGTATACTTGGGAGCACATTCTCATGGTCCAAACCCTTCATCTGTTGATCTTGAAACTGCTACTCTTTCTCATTACGATTTATTGGGTTCAATCTTGGGAAGCCATGAGAAAGCGAAAGAAGCAATTATTTATTCATATAATCAACACATAAATGGCTTTGCAGCTGCACTTGAAGAGGAAGAAGCAGAAGATACTGCAAAAAAACCAAATGTAGTGTCCGTGTTCTTGAGCAAAGAGCATAAACTGTACACTACCCGTTCCTGGGAGTTTCTTGGATTGCAAAGGAATGGTGTGAACACAGCATGGCAAAGGGGAAGATTTGGTGAAAAAACAATAATCGGTAACATTGACACAGGTGTTTGGCCTGAATCCACGAGTTTTAGCGACACAGGAATCGGTCTTGTGCCAGCAAAATGGCGTGGGGGCAATGTCTGTCAAATTGACAGATTGCGGGGTTCAAAGAAAATTCCATGTAACAGAAAGCTAATTGGAGCAAGATTCTTCAACAAAGCTTATGAAGCATTCAGCGGCAAACTTCCCTCATCACAACAAACAGCGCGTGACTTTGTGGGCCATGGTACCCACACTCTATCAACAGCTGGAGGAAACTTTGTGGCAGGTGCAAGTGTCTTTGGAAATGGCAATGGCACTGCAAAGGGTGGATCTCCAAGAGCTAGAGTTGCAGCTTACAAAGCATGCTGGTCTCTCACAGATGCTGCTAGTTGCTTTGGTGCAGATGTGTTAGCTGCTATTGATCAAGCCATAAGTGATGGTGTTGATGTGATTTCTGTTTCTATTGGAGGCAGAACTAGTCTTAGTGCTGAAGAAATATTCACAGATGAAGTTTCTATTGGGGCATTCCATGCACTTTCCAAAAATGTATTAGTGGTTGCCGCGGCTGGGAATGATGGACCAACACCTGGAACTGTTCTTAATGTGGCTCCCTGGCTATTCACTATTGCTGCTAGCACAATAGATAGGGACTTCAGCAGCACTTTAACTTTTGGTAACAATCAGAAAATCACGGGAGACAGTCTTTTTGTAAATTTACCACCTAATCAGTCCTTTTCTCTGATCCTTGCTACTGATGGGAAATTTGCCAATGCAACAAATCGAGATGCTCGATTTTGTAGGGCTGGGACACTTGATCCTAGAAAAGTGAATGGCAAAATAGTGTCGTGCCTTCGAGAAGGAAAAATAAAATCAGTTGCAGAAGGTCAAGAAGCTCTATCTGCTGGTGCCAGGGGAGTGATTTTGGGCAATCAAAAGCAAAATGGGAACACACTTCTTGCTGAGCCTCATGTTTTATCCACCGTCAACTATCCGCAGAATCATTCAATAACAAATCCTGCTAAGTTTAACTTAACTGCAACGGACTCTACGATAAAATCGGGCAATACAATAAGGATGTCTTCGGCAAGAACTTTGTTTGGAATAAAGCCAGCTCCAGTTATGGCTTCATTCTCCTCTAGAGGACCCAATAAGATTCAACCATCAATACTCAAGCCTGATGTAACTGCACCCGGTGTGAACATACTTGCTGCCTATTCACTATTCGCTAGTGCATCAAACCTACCTTCAGACCCTCGCAGAGGGTTTCCATTCAATGTTTTGCAAGGAACTTCTATGTCTTGCCCTCATGTCGCTGGCATTGCTGGACTTATCAAAACACTTCATCCTAGTTGGAGTCCAGCAGCTATTAAATCAGCAATCATGACCACAGCAAGCACAAGAGATAACACCAACAGACCAATACGGGATGCGTTTGATAAAACATTGGCAAACCCGTTTGCTTATGGTTCAGGACATGTTCAACCTAACTCAGCAATAGATCCTGGACTTGTTTATGATCTAAGCATTGTTGATTACTTGAACTTCCTATGTGCTTCTGGATACGACCGACAACTCATTTCCGCACTTAATTTCAACAAGACATTCACTTGTTCAGGATCTCACAGCATAACTGACTTGAACTACCCTTCAATAACAATGCCAAATCTTGGGTTAAATGCCATGGTTGTCACTCGCACGGTCACCAATGTTGGGCCACCAAGCACCTATGTTGTAAAAGCCCAATTGCCTGGATATAACATTGTTGTTATACCCAATTCCTTGACTTTCAAGAAAGTTGGTGAAAAGAAGACATTCAAGGTTACTGTACAAGCTTCAAGTGTAACTAAGCGGGGAAATTATAGTTTTGGGGAATTGCTGTGGACAAATGGAAAGCACATAGTCAGAAGTCCCATCACAGTTCGGCGCAAATGA 2349 0.4266 MDRSLRLSSFLILSLLLNFVHASKKCYIVYLGAHSHGPNPSSVDLETATLSHYDLLGSILGSHEKAKEAIIYSYNQHINGFAAALEEEEAEDTAKKPNVVSVFLSKEHKLYTTRSWEFLGLQRNGVNTAWQRGRFGEKTIIGNIDTGVWPESTSFSDTGIGLVPAKWRGGNVCQIDRLRGSKKIPCNRKLIGARFFNKAYEAFSGKLPSSQQTARDFVGHGTHTLSTAGGNFVAGASVFGNGNGTAKGGSPRARVAAYKACWSLTDAASCFGADVLAAIDQAISDGVDVISVSIGGRTSLSAEEIFTDEVSIGAFHALSKNVLVVAAAGNDGPTPGTVLNVAPWLFTIAASTIDRDFSSTLTFGNNQKITGDSLFVNLPPNQSFSLILATDGKFANATNRDARFCRAGTLDPRKVNGKIVSCLREGKIKSVAEGQEALSAGARGVILGNQKQNGNTLLAEPHVLSTVNYPQNHSITNPAKFNLTATDSTIKSGNTIRMSSARTLFGIKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLPSDPRRGFPFNVLQGTSMSCPHVAGIAGLIKTLHPSWSPAAIKSAIMTTASTRDNTNRPIRDAFDKTLANPFAYGSGHVQPNSAIDPGLVYDLSIVDYLNFLCASGYDRQLISALNFNKTFTCSGSHSITDLNYPSITMPNLGLNAMVVTRTVTNVGPPSTYVVKAQLPGYNIVVIPNSLTFKKVGEKKTFKVTVQASSVTKRGNYSFGELLWTNGKHIVRSPITVRRK* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2384 782 Pfam Fibronectin type-III domain 684 779 IPR041469 -
Apr4g2384 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Apr4g2384 782 Gene3D Peptidase S8/S53 domain 139 651 IPR036852 GO:0004252|GO:0006508
Apr4g2384 782 Pfam Subtilase family 136 609 IPR000209 GO:0006508|GO:0008236
Apr4g2384 782 Gene3D - 655 781 - -
Apr4g2384 782 CDD Peptidases_S8_3 108 604 IPR034197 -
Apr4g2384 782 Gene3D - 354 505 - -
Apr4g2384 782 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Apr4g2384 782 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Apr4g2384 782 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Apr4g2384 782 Pfam PA domain 399 475 IPR003137 -
Apr4g2384 782 Pfam Peptidase inhibitor I9 27 109 IPR010259 -
Apr4g2384 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 780 IPR045051 -
Apr4g2384 782 SUPERFAMILY Subtilisin-like 112 642 IPR036852 GO:0004252|GO:0006508
Apr4g2384 782 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 16 780 - -
Apr4g2384 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 111 IPR037045 -
Apr4g2384 782 ProSiteProfiles Serine proteases, subtilase domain profile. 115 638 - -
Apr4g2384 782 CDD PA_subtilisin_like 360 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2384 Apr-Chr4 32744146 32749150 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2384 13 780 Subtilisin-like Serine Gene Family AT5G59810 52.252 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2384 - - gmx:100803751 1360.13