Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2383 ATGGCACCCACCTTTCAAAGGGAAAAATCCATCGTGATTCTATCTTTTTGTGTCTTTCTAACACTCTTGTTGCGCCAAGCTGCTGCTGAAGAAGGTGAAGCAAATGCTTTGTTAAAGTGGAAACAAAGCCTTGACAACCAAACCCAAGCTTTGTTGTCAACTTGGAGAGGTACTATTAGTCCATGCAAATGGGAAGGAATTCAGTGTGACAAATCCAAGTCTGTCTCTAGCATAAACCTTGCAAATTATGGACTCAAAGGTACACTTCACAGTCTCAGCTTCTCCTCACTCCCCAACCTCCTTAGCCTAAATATATACAACAACTTCTTCTATGATACCATTCCTCAACAAATAGGTAACATGTCCAAAGTTAATGATTTGAACTTCTCCTCAAATTCTTTTGATGGTTCCATCCCTCAAGAAATGGGGACATTAAGGAGTATTCGTAAGCTTGATCTTTCATTATGTCTACTAAGTGGAGAGATTCCCAATTCCATAGCAAACTTGTCCAACTTGTCATTTCTAGATTTAGGTGGCAACAATTTTTCTAGCTCCATTCCTCCAGAGATTGGAAAGTTGATTAATTTGGAGTATCTAGGGATTGCAGGTAGTAAAATTTTTGGTTCCATTCCCCAAGAAATTGGAATGTTGACAAACCTTAGGCTTATTGATTTGTCAAGAAACTTTCTCTCTGGTCCTATCCCTGAAACAATAGGTAACATGAGCAATTTAAATCAACTTTACCTTTCTAATAACACTATGTTATCTGGGCCAGTTCCATCTTCCTTATGGAATATGTCTAACTTGACCTTGCTCTACCTTGATAAAAATAAATTTTCTGGATCAATCCCAGCTTCCATAGAAAACTTGGCCAATTTAGTGGATCTTGCACTTGATAAAAACCAACTTTCCGGGACAATTCCTTCCACCATTGGAAACTTGACAAAACTCACCGATTTGTATTTGGGTTTTAATAATCTTTTTGGATCAATTCCACCCTCTATAGGAAATTTGATAAATTTAAATGCCCTTAGTCTCCAAGTAAACAATCTCTCTGGAACAATTCCTGCCACAATTGGAAATTTGAAAATGCTCAAAGTTTTGGAATTGTCCACCAACAAACTTAATGGCAGCATTCCACAAGTCTTGAATAACATTACCAATTGGCTTTCCTTTTTAGTTGCTGAGAATGATTTTATAGGTCAATTGCCGCCTCAAATATGTTCTGGTCAGTCACTAGTGTACTTAAATGCTTTTGACAACCATTTCACTGGTCCAATACCAACAAGCTTGAAGAACTGTTCCAGTATTGTTAGACTCAGACTTGAAGGAAACAAAATGGAAGGAGATATAGCACAAGATTTTGGTATATATCCAAATTTAAAATACATTGATTTGAGTGACAATAAATTTTCTGGTCAAATTTCACCGAATTGGGGGAAGTGCCTCAATCTCTATACCTTCAAGATATCCAAAAATAATATATCTGGTCGTATCCCAACGGAATTTGTTGAGGCATCCAAGCTAGGTGCTCTTGACCTTTCTTCTAACCACTTGAATGGAAAGCTTCCAAAGGAATTGGGTAGTATGAAATCATTAGTTCAACTCAAGATTAGCAATAATCATCTTCTAGGAAACATTCCAACAGATATTGGGTTACTGCATAATCTTGTAGATTTGGATTTGGGAAATAACAATTTCAGTGGCACAATACCAATAGAAGTTGTGGAGTTACCGAGGTTACAAAACTTGAATTTGAGCAAAAACAAAATTGATGGAAGCATTCCCTCTCAACTTAGTCAAACTTTGGCATCTATTGATCTTAGTTCCAATTTATTGAGTGGAATAATACCATCAACTCTTGGAGGGTTGCAATTCTTGTCAATGTTGAATCTCTCACATAATAGTCTTTCTGGCACCATTCCTTCCACTTTTAGCAAAACATTAGATTTTGTCAACATATCAGACAACCAATTGGAAGGGCCACTTCCAAACAGTCCAGCTTTTCTTCATGCTTCAATTGACTCATTGAAAAATAACAAAGGCTTGTGTGGCAATGTTCCAGGCTTGATTCCATGTCCAACCAACCATAATCGAAAAAGCAACAACGTCATTATGGTGGTGTTCCTTATTTTAGGAAGTGTGATACTAGTGTTGTGTGGGATGGGATTTTTAGTGTATACTTTTTGTTGCAGTAAAAGAAAAGAAGAAAGTCATTTTGAAGAAGCACCAAAGGAAGTATTCTTTTCTATATGGAGCTATGATGGAAAAATGATGTTTGAAAACATCATCGAAGCTACAGAGAATTTTGATGACAAATATCTCATTGGAACAGGAAGTCAAGGATATGTTTACAAGGTGCAGTTTTCTACAGGTTTGGTTGTTGCTGTGAAAAAACTTCATTCAGTGATAGATGAGGAAATGTCAAATTTTAGTTCCAAGGCTTTTGCAAGTGAGATTCAAACCTTGACAGAAATCAAACACAGAAACATTATAAAATTGCATGGATTTTGCTCACATTCACAGTTCTCATTCTTGGTTTATCAATTCTTGGAAGGGGGTAGCTTGGATCAAATGCTTAATAATAATACACAAGCAATTGAATTTGATTGGGAAAAAAGGGTGAATGTTGTTAAAGGTGTGGCCAATGCTTTATCTTATTTGCATCATGATTGTTCCCCTCCTATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAGATCTTGAATATGAAGCTCATGTCTCTGACTTTGGGACAGCTAAGTTTCTAAAGCCAGGTTCACGTAGTTGGACCCAATTTGCAGGCACCTTTGGGTATGCTGCTCCAGAGTTGGCTGAGACAATGGAAGTGAATGAGAAATGTGATGTTTATAGTTTTGGTGTACTTGCTTTGGAAATCATAATGGGAAAACATCCAAGAGATCTCATTTCTCAATTTATGTCACCATCTTTGGCTCAAATTGCAAATGATTTACTACTAGTTGATGTGTTAGATCAAAGACCTCCTCAACCTACAAAGCCAATTGATGCAGAGGTGATCTTGGTTGCAAGGTTAGCATTTGCTTGCTTGGATAAAAATCCACGTTCTCGACCAACCATGGATCAAGTATCTAAGACACTTGTAGCAGGGAAATCACATTTGCCTGATCAATTTTCCATGATTAGATTAGGACAACTCTACTAA 3189 0.3703 MAPTFQREKSIVILSFCVFLTLLLRQAAAEEGEANALLKWKQSLDNQTQALLSTWRGTISPCKWEGIQCDKSKSVSSINLANYGLKGTLHSLSFSSLPNLLSLNIYNNFFYDTIPQQIGNMSKVNDLNFSSNSFDGSIPQEMGTLRSIRKLDLSLCLLSGEIPNSIANLSNLSFLDLGGNNFSSSIPPEIGKLINLEYLGIAGSKIFGSIPQEIGMLTNLRLIDLSRNFLSGPIPETIGNMSNLNQLYLSNNTMLSGPVPSSLWNMSNLTLLYLDKNKFSGSIPASIENLANLVDLALDKNQLSGTIPSTIGNLTKLTDLYLGFNNLFGSIPPSIGNLINLNALSLQVNNLSGTIPATIGNLKMLKVLELSTNKLNGSIPQVLNNITNWLSFLVAENDFIGQLPPQICSGQSLVYLNAFDNHFTGPIPTSLKNCSSIVRLRLEGNKMEGDIAQDFGIYPNLKYIDLSDNKFSGQISPNWGKCLNLYTFKISKNNISGRIPTEFVEASKLGALDLSSNHLNGKLPKELGSMKSLVQLKISNNHLLGNIPTDIGLLHNLVDLDLGNNNFSGTIPIEVVELPRLQNLNLSKNKIDGSIPSQLSQTLASIDLSSNLLSGIIPSTLGGLQFLSMLNLSHNSLSGTIPSTFSKTLDFVNISDNQLEGPLPNSPAFLHASIDSLKNNKGLCGNVPGLIPCPTNHNRKSNNVIMVVFLILGSVILVLCGMGFLVYTFCCSKRKEESHFEEAPKEVFFSIWSYDGKMMFENIIEATENFDDKYLIGTGSQGYVYKVQFSTGLVVAVKKLHSVIDEEMSNFSSKAFASEIQTLTEIKHRNIIKLHGFCSHSQFSFLVYQFLEGGSLDQMLNNNTQAIEFDWEKRVNVVKGVANALSYLHHDCSPPIVHRDISSKNVLLDLEYEAHVSDFGTAKFLKPGSRSWTQFAGTFGYAAPELAETMEVNEKCDVYSFGVLALEIIMGKHPRDLISQFMSPSLAQIANDLLLVDVLDQRPPQPTKPIDAEVILVARLAFACLDKNPRSRPTMDQVSKTLVAGKSHLPDQFSMIRLGQLY* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2383 1062 ProSiteProfiles Protein kinase domain profile. 770 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2383 1062 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 245 1061 - -
Apr4g2383 1062 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 175 - -
Apr4g2383 1062 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 171 246 - -
Apr4g2383 1062 Gene3D Ribonuclease Inhibitor 388 695 IPR032675 -
Apr4g2383 1062 SMART LRR_typ_2 314 338 IPR003591 -
Apr4g2383 1062 SMART LRR_typ_2 217 241 IPR003591 -
Apr4g2383 1062 SMART LRR_typ_2 362 385 IPR003591 -
Apr4g2383 1062 SMART LRR_typ_2 266 290 IPR003591 -
Apr4g2383 1062 SMART LRR_typ_2 97 121 IPR003591 -
Apr4g2383 1062 SMART LRR_typ_2 578 602 IPR003591 -
Apr4g2383 1062 SMART LRR_typ_2 169 193 IPR003591 -
Apr4g2383 1062 SMART LRR_typ_2 624 647 IPR003591 -
Apr4g2383 1062 SMART LRR_typ_2 530 554 IPR003591 -
Apr4g2383 1062 Gene3D Transferase(Phosphotransferase) domain 1 851 1053 - -
Apr4g2383 1062 Pfam Protein kinase domain 772 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2383 1062 Pfam Leucine rich repeat 602 659 IPR001611 GO:0005515
Apr4g2383 1062 Pfam Leucine rich repeat 219 279 IPR001611 GO:0005515
Apr4g2383 1062 SUPERFAMILY RNI-like 344 663 - -
Apr4g2383 1062 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Apr4g2383 1062 Gene3D Ribonuclease Inhibitor 186 284 IPR032675 -
Apr4g2383 1062 Gene3D Ribonuclease Inhibitor 285 387 IPR032675 -
Apr4g2383 1062 ProSitePatterns Tyrosine protein kinases specific active-site signature. 896 908 IPR008266 GO:0004672|GO:0006468
Apr4g2383 1062 SUPERFAMILY RNI-like 77 386 - -
Apr4g2383 1062 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Apr4g2383 1062 SUPERFAMILY Protein kinase-like (PK-like) 754 1042 IPR011009 -
Apr4g2383 1062 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 171 246 - -
Apr4g2383 1062 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 175 - -
Apr4g2383 1062 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 245 1061 - -
Apr4g2383 1062 Gene3D Phosphorylase Kinase; domain 1 731 850 - -
Apr4g2383 1062 SMART LRR_sd22_2 266 292 - -
Apr4g2383 1062 SMART LRR_sd22_2 362 388 - -
Apr4g2383 1062 SMART LRR_sd22_2 217 243 - -
Apr4g2383 1062 SMART LRR_sd22_2 554 575 - -
Apr4g2383 1062 SMART LRR_sd22_2 314 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2383 Apr-Chr4 32719878 32724150 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2383 12 944 Receptor kinase-like Gene Family AT4G08850 43.743 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr4g2383 Pkinase 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2383 - - gmx:100815688 1421.37