Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2379 ATGGAAGGAGAGAGAGGTGGTGCTCCCAATTATGAGCTTCAAGTTTCATTCACCAACACCCCACAAGCTATCCACGAAATGGGTTTTGTTCAATTTGAAGAAAACCATATTCTTGGATTCTTGTCACCCTCTTCACAATCTCAATCTTCTCAGCTCTCTCAATCCTTAAACTGTGTCACAACCACCACAACCGCCACAACCATCGGATTCATGAGTCATAACGAACTTGTCACCAAAACTTGGAATAACGACCAGGTAGGGACTCTGGATCCAAAAGCTGTCAATGATGAAAATTGCACTGGAAATGCTAGTGATGGCAATAACAACGCTTGGTGGAGGAGCGTAGCTACGGAGAAGAGCAAGGTGAAAATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGCGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCGAGAAGTTATTACCGATGCACCCACAGCAACTGTAGGGTGAAGAAAAGAGTGGAAAGACTCTCAGAAGACTGTCGTATGGTGATAACCACATACGAAGGAAGACACAATCATTCCCCTTGCGACGACTCCAATTCATCTGAACATGAATGCTTTACCTCTTTCTAG 657 0.4353 MEGERGGAPNYELQVSFTNTPQAIHEMGFVQFEENHILGFLSPSSQSQSSQLSQSLNCVTTTTTATTIGFMSHNELVTKTWNNDQVGTLDPKAVNDENCTGNASDGNNNAWWRSVATEKSKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2379 218 ProSiteProfiles WRKY domain profile. 139 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2379 218 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 14 216 - -
Apr4g2379 218 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 216 IPR044810 GO:0003700
Apr4g2379 218 Gene3D WRKY domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2379 218 SMART WRKY_cls 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2379 218 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2379 218 SUPERFAMILY WRKY DNA-binding domain 136 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2379 Apr-Chr4 32673535 32681268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2379 3 218 WRKY Transcription Factor Family AT2G44745 58.036 1.08e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g2379 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2379 - - gmx:100170677 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2379 4 32673535 32681268 Apr4g2379 4 32673535 32681268 ECH