Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2378 ATGCTCCTCCATTACTCTCAGCAATTCCCAATTATATCTTGTTACTCACACAACTCTTACCGAGGCCCAAATACAAAGGGTTACATAAAGTTCCGAACAAGGTACCACGAAAACCTCCGATACCTTCGAGCCCTAACCATAATCCACCCAAAAACCAAACACGAGGACCTTCCTCTCCCCGACACCGTCGACCACATCCTCGCCACCCTCACCTTCCTCAAATCTCACTCCTTCTCCGACACCGACATCCCTCGCCTCAACTTTCTCACCCCTCAGCTTTTCTCCTCCGCCGTCGCCCCCGCCGACATCGCCCCCGTCTTCCGCTTCCTCGCCGCAGAACTCCCCGCCACCGCATCCCAATCCCACGGCCTCATCCTCCGCTGCCCCAAACTCCTCTTCTCCGACGTTGACCTCTGCCTCCGCCCAACGCTCCACTTTCTCCGCCAGATTGGGGTGGGAGAGCTGAACCGGGCGACGAACCGTAACGCGCATCTGTTGAACACGCGCGTGGAGAAACTGCACGGGAAGGTGAGGTTCCTGGAGGAGGTGGGATTCACGCACGAAGAGGCGATTAATGTTTGTGCGAGGTTGCCAGCGATTTTTGGGTATGACGTGGAGAACAATCTATGGCCCAAGTTTGCGTATCTTGTGAAGGAGATGAAGAGGGAATTGGAGGAGTTGAAGAGGTTTCCTCAGTACTTTGGGTTCAGTTTGGAGAAAAGGATTGTGCCCAGACATTTGCATTTGAAGCGAAGAGATTCGGAAAGCATCTCTTATGTCCAATGTCCAATGTTACTTGGTATCTTTCCTATACCAAAATGA 822 0.528 MLLHYSQQFPIISCYSHNSYRGPNTKGYIKFRTRYHENLRYLRALTIIHPKTKHEDLPLPDTVDHILATLTFLKSHSFSDTDIPRLNFLTPQLFSSAVAPADIAPVFRFLAAELPATASQSHGLILRCPKLLFSDVDLCLRPTLHFLRQIGVGELNRATNRNAHLLNTRVEKLHGKVRFLEEVGFTHEEAINVCARLPAIFGYDVENNLWPKFAYLVKEMKRELEELKRFPQYFGFSLEKRIVPRHLHLKRRDSESISYVQCPMLLGIFPIPK* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2378 273 SMART mt_12 156 186 IPR003690 GO:0003690|GO:0006355
Apr4g2378 273 SMART mt_12 122 153 IPR003690 GO:0003690|GO:0006355
Apr4g2378 273 SMART mt_12 191 223 IPR003690 GO:0003690|GO:0006355
Apr4g2378 273 SMART mt_12 224 255 IPR003690 GO:0003690|GO:0006355
Apr4g2378 273 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 17 255 - -
Apr4g2378 273 Pfam mTERF 124 255 IPR003690 GO:0003690|GO:0006355
Apr4g2378 273 Gene3D Transcription termination factor 3, mitochondrial 46 263 IPR038538 -
Apr4g2378 273 PANTHER CGI-12 PROTEIN-RELATED 17 255 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr4g2378 mTERF 6.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2378 K15032 - gmx:100812333 390.963