Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2367 ATGGCCTCCCCTTCATCCCCAACGGACTCTAACCCTCCCTCCGCGGTGCCCCTTCCGCTCCCCGCGCCGCCGTCCTCCTCCTCTCGCCGCCTCCCGCCGCCCTGCTGGACCCCTGAGGAAACCGCTGCACTCATCGACGCCTACCGCGACAAATGGTACTCCCTCGGCCGCACCAACCTGAAAGCCACCCACTGGCAGGAGGTCGCCGACGCCGTCACGGCGCGGTGCCCCAACGCCTCTCCGGCTGCGAAAACCGCCGTGCAGTGCCGCCACAAGATGGAAAAGCTTCGCAAACGCTACCGCACCGAGATCCAGCGCCTTCGGTCCCTCCCCGTTGCGCGATTCAACTCTTCCTCTTCCTGGGTCCATTTCAAATCCATGGATTCAATGGAAAAAGGTCCCTCTCCACCCAAACCAGAAAACGACAACCTCAACACCCACGACAACCTCGACGACATCGACGACGATGACGACGACGATTTGTACGAAGAATTCAAGAACGCTTCCGGATCCAACACGAGGAGCCTCAACAAGCTGTACAGAAACGGAATCGGTGGCTCCGGATCAGGATCCGGGTTTCGGATTCGGATCCCAACTGGCGTTAGCGTGGCGCAACATGGATCGTCGAAATTCTTCGGGAAGGTTGTTGGGGATCAGAAAGTGAATAACCCTATGATGGGTTCGGGTTCTGGTTCTGGTTCGGTGCCACGTGGCGCGACGAATGGAACTAGGGTTGTGAAGGGGTTGGGGAAGAGAGAGAGGGACCCTGTTGGGGAAATGGTTAGTGCTATTAAGGTTTTGCGTGATGGGTTCGTTAGGATGGAGCAAATGAAGATGGAGATGGCGAGGGAGATTGAGACCATGCGCATGGAGATGGAGATGAAGCGCACTGAGATGATTCTCGAGTCCCAGCAGAGGATTGTTGAGGCTTTTGCTAAGGCTGTTTCTGAGAAGAGGAAGAAGGGTAAGACTACCCCATCACCATCACAACCCTAG 996 0.5703 MASPSSPTDSNPPSAVPLPLPAPPSSSSRRLPPPCWTPEETAALIDAYRDKWYSLGRTNLKATHWQEVADAVTARCPNASPAAKTAVQCRHKMEKLRKRYRTEIQRLRSLPVARFNSSSSWVHFKSMDSMEKGPSPPKPENDNLNTHDNLDDIDDDDDDDLYEEFKNASGSNTRSLNKLYRNGIGGSGSGSGFRIRIPTGVSVAQHGSSKFFGKVVGDQKVNNPMMGSGSGSGSVPRGATNGTRVVKGLGKRERDPVGEMVSAIKVLRDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKRKKGKTTPSPSQP* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2367 331 Pfam Myb/SANT-like DNA-binding domain 34 130 IPR044822 -
Apr4g2367 331 Gene3D - 36 102 - -
Apr4g2367 331 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 327 IPR044823 -
Apr4g2367 331 MobiDBLite consensus disorder prediction 1 35 - -
Apr4g2367 331 MobiDBLite consensus disorder prediction 10 31 - -
Apr4g2367 331 MobiDBLite consensus disorder prediction 149 163 - -
Apr4g2367 331 MobiDBLite consensus disorder prediction 127 177 - -
Apr4g2367 331 Coils Coil 90 110 - -
Apr4g2367 331 PANTHER TRANSCRIPTION FACTOR 4 327 - -
Apr4g2367 331 SMART 118neu2 43 135 IPR006578 -
Apr4g2367 331 ProSiteProfiles Myb-like domain profile. 36 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2367 Apr-Chr4 32597459 32599243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2367 35 130 Trihelix Transcription Factor Family AT3G14180 35.417 2.71e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr4g2367 Myb_DNA-bind_4 5.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2367 - - cam:101501151 394.045