Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2360 ATGGCCGGCATAGACTTGGGTTCAGCATCACACTTTGTTCATCATCGCCTTCAACGCCCTGACCTTGAAGATGATGAGAACCAACAAGACCATGACAACACCATCAACAACAATGAAGGGCTTGACCTAGTTTCACCAAATCAAGGTCCTGGTGATGTTGTTGCTCGCAGGCCAAGGGGAAGACCCCCAGGTTCAAAGAACAAGCCTAAACCACCAGTTATCATCACAAGGGAGAGTGCAAACACGCTTAGGGCTCACATCCTTGAAGTTAGTAGTGGTTGTGATGTGTTTGACTCAGTGGCTACCTATGCAAGGAAGCGCCAAAGAGGGATCTGTGTCCTCAGTGGAAGTGGCACCGTGACCAACGTTACGTTGCGCCAGCCGGCTGCGGCTGGCGCCGTCGTCACGTTGCACGGAAGATTTGAGATTCTGTCCTTATCAGGGTCGTTTCTTCCACCTCCAGCCCCACCAGGTGCTACCAGTTTAACTGTGTTTCTTGGTGGGGGGCAAGGTCAAGTTGTGGGAGGGAATGTTGTTGGTCCATTAGTCGCATCAGGGCCTGTTATTGTTATTGCTTCATCTTTTACTAACGTAGCATATGAGAGGCTGCCCTTGGATGAAGATGATTCCTTGCAGATGCAACAAGGGCAATCATCTGGTGGTGGCGGTGGTAGTGGTGGTGGAGTTAGTAATAACTCTTTTCCTGACCCTTCTTCTGGGCTTCCTTTCTTCAATTTGCCTTTAAACATGCCTCAGTTACCTGTTGATGGTTGGGTTGGGAACTCTGGTGGAAGGCAATCTTATTGA 807 0.4957 MAGIDLGSASHFVHHRLQRPDLEDDENQQDHDNTINNNEGLDLVSPNQGPGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEDDSLQMQQGQSSGGGGGSGGGVSNNSFPDPSSGLPFFNLPLNMPQLPVDGWVGNSGGRQSY* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2360 268 MobiDBLite consensus disorder prediction 19 74 - -
Apr4g2360 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 268 IPR014476 GO:0003680
Apr4g2360 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 268 - -
Apr4g2360 268 MobiDBLite consensus disorder prediction 211 239 - -
Apr4g2360 268 CDD DUF296 84 159 IPR005175 -
Apr4g2360 268 Gene3D - 83 217 - -
Apr4g2360 268 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Apr4g2360 268 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 211 - -
Apr4g2360 268 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Apr4g2360 268 MobiDBLite consensus disorder prediction 211 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2360 Apr-Chr4 32538267 32539332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2360 1 265 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 62.951 7.39e-98 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2360 - - gmx:100803960 446.432