Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2354 ATGCAAACCTTCTTCTTCTCAATATTCATATTCATCTTCCCATATGGAAATCAGCAACAAGTCTCATCCAAACCCTTCCTCACACACACCAACACCAACAGAAGGATCCTCCATGAACCCTTTGTGCCACTCAACACACTGTCACCATCAGAACCACCAAAGCCAGCACCTCCTAACCCATCCCCTTCAACCCAAAAACCAAAGTACCCATCATCCACCATTCCCACCACAGCCACAACCACAACCACAACCACAACCACCACAACACCAAACCCAAACAATTCACCGTTTTTCCCATTATACCCCTCATCACCTCCACCTCCTTCTCTGTCCACCTTTGCTTCCTTCCCAGCTAACATCTCTTCTCTCATTCTTCCTCACTCTCCCAAACCTAATTCCTCTTCCCACAAACTCCTTCCCATTGCTCTCTCCGCCGTCACCCTCGCCATCCTCGCTGTTGCCATTTCCGTCTTCGCTTACCATCGCCGCCGGAACCGCCGTGCCGGAAAAATTCTCCGATCCGACACCGACCTCCTGCCGTTTCACTGCAATGCCGAACCCGCCGTAGAAACCCGCAAGCTCCGGCACACGTCTTCCACTAGCTCTGAATTCCTTTACCTCGGCACCGTCGTGAATTCGCACAGAATTGAAGATAGCACCGATGCCGGCGGCGAGGACGCTCGGAAAATGGAGTCGCCGGAGCTCCGGCCACTCCCCCCTCTGGCACGACAACCTTCACTGCCGCCACCTCCGCCGCCGCGTGACGAGGCGGGTTTTACGACTGCGGAGGAGGAAGACGAGGAGTTCTACTCGCCGAGAGGATCGTCTTTGGGAGGCTCCGGCGGAACTGGATCGGGTTCCCGGCGAGTGTTCTCAGCCGGAAGAAGCGGCCACATGAGCTCTATCTCGTGCTCGTCCTCCTCTTCCGGTTCGCCGGACCGGTCTCACTCGATCACCGTCTCGCCGCCGGCGAGCCCGAGTCTCCGAAGAACACGATCAAAATCTCCGGAAATTCACAACCAACAACACGTGCAATCTTCTTCTTCTCCTTCGTTGTGTTCAACACCAGAGAGAACTTTCACTGAAGATGATGATACTCATTCTCTTTCCTTGCCACAGAACACAGCTTCGGAGAAAAACACAAATGACGCATTGAATGCATGTGCAAACGCACATGCACCATCATCGTCGTCGTCATCACCACCACCAAGGGTATCAAACGCTTCATCTTCAGCATTTTCTCTACCCTCTTCGCCGGAGAAGGTGACACGTCATCACAGTTTCGATCAGTCTCCGAGATTTTCGAGTTTCTCCGAGGGGCTAATGTTACCGGGTCTGTCATCATTGCCTTTGTCACCCGCACTGCTTTCATCACCAGAAACCGAAAGGGGTTTCAGTGTTACTTCAAATGAATTGGGAACAGGTTCTAATGGTAGAAAACACTGGGAAATTCCAGGTCTTTCCAGGCACATTGCTCCGCCGCTCCCACCGCCATTGCCGCTGTTACAGCGGCAAAGGAAACAGTGGGATGTGCCACTGGCAGAGGCCTCAACACCTGTCGGTCAACCCATTTCGAGGCCGCCGGAATTAGTACCGCCTTCGAGGCCTTTCGTGTTGCAAGGCCAAACAAACGTTTCCCCTGCAGAGTTGCCGGCGAGTTTGGGGGAAATTGAAGAGAATTGCAAGCCCAAGTTGAAGGCCCTGCATTGGGACAAAGTCAGAACAAGCTCTGATCGTGAAATGGTGTGGGATCAGTTGAAGTCGAGTTCCTTTAAATTGAATGAGGAAATGATTGAAACATTGTTTGTAGTGAACACACCAAACCCGAAACCCAAGGATGCTACTTCACACTCGGCTTTTCCCCTGCCAAATCAGGAGGACAGAGTACTTGATCCTAAAAAGTCTCAGAATATTGCAATCTTGCTGAGAGCTCTTAATGTCACTATAGAAGAAGTGTGTGAAGGACTTTTAGAAGGTAGTACTGATACACTTGGAACAGAATTACTCGAAAACTTATTAAAAATGGCACCAAGTAAGGAAGAAGAACGTAAATTGAAAGAATATAAAGATGACGCACCAACCAAGCTTGGTCTGGCTGAGAAATTTTTAAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGGTTGAAGCAATGCTTTACATAGCCAATTTTGAATCTGAAGTGGAGTATCTTAGGGCATCCTTTCAAACTCTAGAGGCTGCATGTGAAGAGCTGCGAAATTGTAGAATGTTCTTGAAGCTTCTGGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGCACCAACCGTGGTGATGCAGAGGCATTCAAACTTGATACTCTTCTCAAGCTGGCTGATGTCAAAGGTGCTGATGGGAAAACCACTCTACTGCATTTTGTTGTACAGGAGATTATTAGAACTGAAGGTGCTCGTCTCTCTGGTACTAATCAAACTCCAAGCTCTACTTTGAGTGACGATGTCAAGTGTAGGAGGCTTGGCCTACAAGTTGTATCAAGTCTGAGTTCAGAGCTAGCAAATGTGAAGAAGGCTGCTGCTATGGATTCTGAAGTTCTCAGCAGTGATGTCTTAAAACTTTCCAAAGGAATTGCTAACATAGCAGAGGTTGTGCAATTAAACCAAACAGCAGGATCAGATGGAAGCAGTCAGAAGTTTACAGAATCAATGAACAAATCCATTAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGTCCAAGAAAGGGTTGCTTTGTCCCTTGTAAAGGAGATTACAGAATATTTTCATGGGAACTTGGCAAAGGAAGAAGCTCATCCTTTTAGAATCTTCATGGTTGTAAGAGACTTTTTAACAGTTCTTGACCGGGTCTGCAAAGAAGTTGGTATGATAAATGAGAGAACCATGATTAGTTCAGCCCATAAATTCCCGGTTCCAGTTAACCCAATGCTTCCACAACCCCTTCCTGGATTACATGGGAGGCAACAATATAATAACTCCTCAGATGATGACAGTCCATCACCTTAG 3027 0.48 MQTFFFSIFIFIFPYGNQQQVSSKPFLTHTNTNRRILHEPFVPLNTLSPSEPPKPAPPNPSPSTQKPKYPSSTIPTTATTTTTTTTTTTPNPNNSPFFPLYPSSPPPPSLSTFASFPANISSLILPHSPKPNSSSHKLLPIALSAVTLAILAVAISVFAYHRRRNRRAGKILRSDTDLLPFHCNAEPAVETRKLRHTSSTSSEFLYLGTVVNSHRIEDSTDAGGEDARKMESPELRPLPPLARQPSLPPPPPPRDEAGFTTAEEEDEEFYSPRGSSLGGSGGTGSGSRRVFSAGRSGHMSSISCSSSSSGSPDRSHSITVSPPASPSLRRTRSKSPEIHNQQHVQSSSSPSLCSTPERTFTEDDDTHSLSLPQNTASEKNTNDALNACANAHAPSSSSSSPPPRVSNASSSAFSLPSSPEKVTRHHSFDQSPRFSSFSEGLMLPGLSSLPLSPALLSSPETERGFSVTSNELGTGSNGRKHWEIPGLSRHIAPPLPPPLPLLQRQRKQWDVPLAEASTPVGQPISRPPELVPPSRPFVLQGQTNVSPAELPASLGEIEENCKPKLKALHWDKVRTSSDREMVWDQLKSSSFKLNEEMIETLFVVNTPNPKPKDATSHSAFPLPNQEDRVLDPKKSQNIAILLRALNVTIEEVCEGLLEGSTDTLGTELLENLLKMAPSKEEERKLKEYKDDAPTKLGLAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRASFQTLEAACEELRNCRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPSSTLSDDVKCRRLGLQVVSSLSSELANVKKAAAMDSEVLSSDVLKLSKGIANIAEVVQLNQTAGSDGSSQKFTESMNKSIRMAEEEIPKIQVQERVALSLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMISSAHKFPVPVNPMLPQPLPGLHGRQQYNNSSDDDSPSP* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2354 1008 MobiDBLite consensus disorder prediction 607 628 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 338 357 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 276 331 - -
Apr4g2354 1008 Pfam Formin Homology 2 Domain 560 954 IPR015425 -
Apr4g2354 1008 SUPERFAMILY Formin homology 2 domain (FH2 domain) 248 966 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 454 478 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 43 101 - -
Apr4g2354 1008 PANTHER FORMIN-RELATED 333 1008 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr4g2354 1008 PANTHER FORMIN-RELATED 23 427 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr4g2354 1008 ProSiteProfiles Formin homology-2 (FH2) domain profile. 555 980 IPR015425 -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 238 256 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 66 94 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 981 1008 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 454 476 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 992 1008 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 366 421 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 218 233 - -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 216 439 - -
Apr4g2354 1008 SMART it6_source 555 969 IPR015425 -
Apr4g2354 1008 Gene3D Formin, FH2 domain 557 963 IPR042201 -
Apr4g2354 1008 MobiDBLite consensus disorder prediction 46 65 - -
Apr4g2354 1008 PANTHER FORMIN-LIKE PROTEIN 1 23 427 - -
Apr4g2354 1008 PANTHER FORMIN-LIKE PROTEIN 1 333 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2354 Apr-Chr4 32488312 32492675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2354 524 996 FH2 protein (formin) Gene Family AT3G25500 75.260 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2354 - - vun:114185313 1166.76