Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2341 ATGTTCTCCTTCTTCCTCCATTGCCACTTCTCCACCACCACCACCACCACCACCACCAAGCTCCCAAAGCTCTCCAGCATACCCACAAGGTACAGAAACTTTGCTCTTCGTGAAGCCCAAAAGGCCCTCATCAACTACCTCTACGCCACTCGCTGCTTACCCTTTACCTACGCAGAGCACATTGGCAACAACACGCTTCGTTCCCTTACTCATCTCATTGCAAAGGTGAAACCTTTTTCAGCTCCTACTTTCCCCAAAAGCTTTGAGAGGGTCCTTAGGTATCACCCCGTTAACGAATTTGAAGTTTTTTTCGAAAGCATCGGCATAGAGTTTGATCTTGTTTCTGGGTTGTTGCCTCATGACAAGGTGTTCTTTTCCGAAGATGGGACCCTTTTCAATGTTGCTTGTGCGCTTTCTGATTTTGGGTTTCCGTGGGAGAAGTTGGGTTTGTTGTACATGGAGAAAAGTTCCATTTTTGGGAGAAGTGTTGCGGAGTTGAAGTCAAGGCTTTTTGGGTTTAAAGGGTTTGGTTTTGGTAATGTTGAAGTCATTGGGATGAGTTTGGCCTTCCCTTTTGTTTTGAGTGAGGAAGGCCAAGTGGGTGTTGAGATTGATGTGTTGTTTGATGAGTTGAAGATGGTGTTTTTGGACTATGGTTTGGATAAGTCTATTGAGGGTGATGTGGATTCTTGGTATGAGATGTGTAGGAAATTACGGTTGTTTTTTGATTTAAATGGATGGAAGGGTGGGTTAGGGGAACTCATAGGAAGGAAGAAGGGTATATTTGTTGAGCATAAAGAAGAGGAATTAGCTAAGAAAATAGAGTATTTTTGTAGATTTGATATGAAGAAGGAGGAAGTGGCTCGGTTGATTCTACTGTGCCCTGAATTGTTGAGTCTTGATTTGGAGAAGCTGGTGATTAACGTGTTAAAGTTGTTGAAACACTTTGGCTTGAGCTCTAAGGGTGTGGAGGATGTTCATCAGAATTTCTCTCATGCATTGGGAACAAATAAAATGGTTAATCTACCTAATGTAATGAGGGCTTTGGGTTTACAAAAGTGGTTTGTCGACAAACTCAAGGATGGACACTGCTGTTTGTTAGCAGATTATATCACAAGCTATCCTTGTGAAGAGCAGAATAAAGATTATCAAGATGGGTTACGGATGATTCATGTTTCAAGAGTTCGAGTTTATAATCTTAGTAAATTAAATTTCTTGCATGGCTTGGGATTTGGAGAGAATGGTTTGACTATGAATGTGTTGAATAATTTGCATGGCACTAGTTATGACTTACAGGAAAGGTTTGATTGCCTTCTACGTTCAAGTATTGAATTCTCAAAGCTCTGTATGATGGTAAGAATGACCCCCAGGATTCTAAACCAAAATTCTGAAATTATGAAGCGAAAGGTGAATTTCTTGCATAAAGAATTCGGAACTACTTTGGACTATGTGAACGCTTTTCCAGCAATGTTGTACTATCATTTGGATGACCGAATCATACCTAGGTACAAATTCCATTTGTGGCTTACAGAAAAGGGTCTGAGTTGTAAAACATATTCCATTCGAAGTATGATTGCAAATGGCGAAAAGAAATTTGTAGCTCGTGTCTTTAAAATTCATCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCTGTCGCAGTAAATTGCCAATGTGA 1677 0.4055 MFSFFLHCHFSTTTTTTTTKLPKLSSIPTRYRNFALREAQKALINYLYATRCLPFTYAEHIGNNTLRSLTHLIAKVKPFSAPTFPKSFERVLRYHPVNEFEVFFESIGIEFDLVSGLLPHDKVFFSEDGTLFNVACALSDFGFPWEKLGLLYMEKSSIFGRSVAELKSRLFGFKGFGFGNVEVIGMSLAFPFVLSEEGQVGVEIDVLFDELKMVFLDYGLDKSIEGDVDSWYEMCRKLRLFFDLNGWKGGLGELIGRKKGIFVEHKEEELAKKIEYFCRFDMKKEEVARLILLCPELLSLDLEKLVINVLKLLKHFGLSSKGVEDVHQNFSHALGTNKMVNLPNVMRALGLQKWFVDKLKDGHCCLLADYITSYPCEEQNKDYQDGLRMIHVSRVRVYNLSKLNFLHGLGFGENGLTMNVLNNLHGTSYDLQERFDCLLRSSIEFSKLCMMVRMTPRILNQNSEIMKRKVNFLHKEFGTTLDYVNAFPAMLYYHLDDRIIPRYKFHLWLTEKGLSCKTYSIRSMIANGEKKFVARVFKIHPAAPKHWFEQFCRSKLPM* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2341 558 Pfam mTERF 252 337 IPR003690 GO:0003690|GO:0006355
Apr4g2341 558 Pfam mTERF 431 532 IPR003690 GO:0003690|GO:0006355
Apr4g2341 558 PANTHER CGI-12 PROTEIN-RELATED 19 551 IPR003690 GO:0003690|GO:0006355
Apr4g2341 558 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 19 551 - -
Apr4g2341 558 SMART mt_12 252 283 IPR003690 GO:0003690|GO:0006355
Apr4g2341 558 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
Apr4g2341 558 SMART mt_12 449 480 IPR003690 GO:0003690|GO:0006355
Apr4g2341 558 SMART mt_12 149 179 IPR003690 GO:0003690|GO:0006355
Apr4g2341 558 SMART mt_12 481 515 IPR003690 GO:0003690|GO:0006355
Apr4g2341 558 Gene3D Transcription termination factor 3, mitochondrial 227 359 IPR038538 -
Apr4g2341 558 Gene3D Transcription termination factor 3, mitochondrial 384 554 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2341 Apr-Chr4 32394368 32396389 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr4g2341 mTERF 6.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2341 - - adu:107486036 780.015