Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2317 ATGGGCAATCACAAGTTACTACAATATTGGGCTGTGTCACTTTGTATGCTTTTCTTGAGTCATTGGATCTGTGTTGAAGCTGCCCCTCAAGGCTCTATCATCACACAACTCCCTGGCTTTAGCGGCACTTTTCCATCCAAGCACTACTCCGGATATATAAGCATTGATGGAAATGCTGAGAGTGGGAAGAACCTGTTCTACTACTTCGTTAGTTCAGAAAGAAGTCCAGGGAAGGACCCAGTTGTTCTATGGCTGAACGGTGGACCTGGGTGCTCCAGCTTCGATGGCTTCGTTTATGAGCATGGACCATTCAACTTTGAGGCTGCAAAATCAAAAGGGAATCTACCCACTTTGCACATCAATCCTTACAGCTGGTCCAAGGTTTCCAACATCATATATTTGGATTCTCCCGCGGGTGTTGGCCTCTCTTACTCCAAGAACTCAAGCAAATATGCTACTGGGGACCTACAAACTGCGTCTGATACCCATGCTTTCCTCTTAGAGTGGTTTCAACAATTTCCAGAATTTCTGGCTAATCCATTTTATATTGCTGGGGAGTCCTATGCCGGAGTTTATGTGCCTACTCTAGCTTTTGAAGTTGTTAAAGGAATCCGGAGTGGTATAAAGCCCGTGATCAAGTTTAAGGGTTACATGGTTGGAAATGGTGTCACGGACGAAATAATTGATGGCAATGCTCTTATCCCATTTGTGCACGGGATGGGCCTCATATCCGACAGTATCTACGAGGAAGTACAAGCTTCTTGCAAAGGAAACTACTACAACTCCTACTCTTTGGACGAAAATGATATGTGTTATAAGAACTTGGAAAAAGTTGATAAGGCAATTGATGGGCTTAACGTGTACAATATACTTGAGCCATGCTACCACTTCCCTGATGCTGCCACAGCCAAAGGAAATGGAAGCTTACCCCTAAGTTTTCATCAATTAGGGGTTACAGAAAGGCCTTTCCCAGTGAGGAAGAGAATGTTTGGTAGAGCATGGCCTTTTAGAGCACCAGTTAAAGCTGGCCTTGTTACATTATGGCCCCAATTGGCTCAAACGAGGCATGTTGCCTGTGTTAGTGATGAAGTAGCAAGTTCATGGTTAAACAACGAAGCAGTGAGGAAAGCCATTCATGCTGAGCTGGAAAGTGTGGCGGGGCAGTGGGAATTATGCACCAATAGGATAGAGTATGATCACAATGCTGGAAGCATGATACCATACCATAAGAACCTAACCATGCTGGGCTATCGAGCACTTATTTTCAGTGGTGACCATGATATGTGTGTGCCATTTACGGGAAGTGAGGCTTGGACCCTATCTTTGGGATATAAGATTGTGGATGAATGGAGGCCATGGAACTCTAATAACCAAATTGCTGGGTACTTGCAAGCATACGAGAAAAACCTCATTTTTCTCACAGTTAAGGGTGCAGGGCACACTGTGCCGGAATATAAGCCACGAGAAGCATTGGATTTTTACAGCCGTTGGTTGGAAGGGAAAGCAATATAA 1512 0.4451 MGNHKLLQYWAVSLCMLFLSHWICVEAAPQGSIITQLPGFSGTFPSKHYSGYISIDGNAESGKNLFYYFVSSERSPGKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGNLPTLHINPYSWSKVSNIIYLDSPAGVGLSYSKNSSKYATGDLQTASDTHAFLLEWFQQFPEFLANPFYIAGESYAGVYVPTLAFEVVKGIRSGIKPVIKFKGYMVGNGVTDEIIDGNALIPFVHGMGLISDSIYEEVQASCKGNYYNSYSLDENDMCYKNLEKVDKAIDGLNVYNILEPCYHFPDAATAKGNGSLPLSFHQLGVTERPFPVRKRMFGRAWPFRAPVKAGLVTLWPQLAQTRHVACVSDEVASSWLNNEAVRKAIHAELESVAGQWELCTNRIEYDHNAGSMIPYHKNLTMLGYRALIFSGDHDMCVPFTGSEAWTLSLGYKIVDEWRPWNSNNQIAGYLQAYEKNLIFLTVKGAGHTVPEYKPREALDFYSRWLEGKAI* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2317 503 Pfam Serine carboxypeptidase 38 500 IPR001563 GO:0004185|GO:0006508
Apr4g2317 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Apr4g2317 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Apr4g2317 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Apr4g2317 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Apr4g2317 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 502 IPR001563 GO:0004185|GO:0006508
Apr4g2317 503 Gene3D alpha/beta hydrolase 27 310 IPR029058 -
Apr4g2317 503 Gene3D - 356 502 - -
Apr4g2317 503 ProSitePatterns Serine carboxypeptidases, histidine active site. 470 487 IPR033124 GO:0004185
Apr4g2317 503 PANTHER CARBOXYPEPTIDASE 17 502 - -
Apr4g2317 503 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Apr4g2317 503 SUPERFAMILY alpha/beta-Hydrolases 34 501 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2317 Apr-Chr4 32210661 32219779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2317 364 503 Calmodulin-binding Proteins AT2G22960 48.571 6.23e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2317 K16296 - gmx:100790895 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2317 4 32210661 32219779 Apr10g1281 10 25141483 25143729 PCT