Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2316 ATGGGGTCCTGCTTCTCTTTGGAAAGCAGGAGCCCACACCCCACTTCACCCTCTTCATCTTTCAGAAAGAGTAAGAGTAACTCCAAGAAGAGGCTTGGATCAAGAGCCTCTTCCTTTGAGTATTGGAGGAATGAGCCACTCCACAGGATCCCTGGTAGGATCTTCCTCAATGGCTCCAGCCAAGTTGCCTCCTTGTTTACTCAACAAGGCAAGAAAGGTACCAACCAGGATGCAATGGTTGTTTGGGAGAACTTTTGTTCCAGACAAGATACAATTTTCTGTGGAGTTTTTGATGGCCACGGTCCATTTGGTCACATGGTTGCTAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGCCAACTGGGAAGTTAATGTATCTGGTGAAGAAGTCCTCAAGGAGATTAGCATTAATACTGCAGGAGGCATGAATTCAGAAGAGGCTGCCTTTGCATCTGCCGATGAGGAATCCAGGGTATCGGTTGATGCTGAGGAAACTGAAAAACACCCTGAAATCTTTCTCACACTTAAAGAGACATTTTTGAAGGCATTTAAAGTTATGGATAGAGAATTGAAGACACACCAAAGTATTGATTGCTTCTGTAGTGGGACAACAGCTGTAACTCTGGTTAAGCAGGGCCGTGATCTTATTATTGGAAATGTTGGTGACTCTAGAGCTGTGCTGGGTACAAGAGAGAAAGATAATAATCTTGTTGCTGTCCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCCGAAGCAGAGAGAATTCACAAATGTAAAGGACGCGTTTTTGCTCTTCAGGATGAACCTGAAGTGGCTCGTGTCTGGTTGCCAAACAACGATTCCCCTGGCCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTTAAAGATTTTGGTCTGATATCTGTTCCAGAGGTATCATACAGACGACTCACAGAGAAAGATGAATTTGTTGTCTTGGCAACAGATGGGATTTGGGATGTGCTCTCAAACAAAGAAGTGGTGGACATTGTGGCGGCTGCCCCAAGGCGTGCCACAGCAGCTCGAGCACTGGTTGAGTCGGCGGTTCGAGCTTGGAGATTCAAGTATCCAACTTCCAAAGTAGATGACTGTGCTGTGGTTTGCCTCTTTCTTGACTCAGACTTACAAAATGTGTCTAGCGCTTCCCATGCCAACAAGTCCTCCATGGAGCAGGCTAGTTCAGCGATCCAAGTTCACAATGGCGATGGAGATGTTTCTGGACCTACTGTTCTAGAAAGGTCTGGAACATGCAGGGAAACCAATGATGCTTCCCATGAAGACAACAATGAGGAAGTGTCCAAGGAAGAGGAAATAGATGCTGAGTCAGAAACAGAATGGTCTGCACTTGAAGGTGTATCACGTGTGAACACTTTGTTAAATCTTCCAAGGTTTGTCCCTGACAAAGAAGACAAGGCTGCTGCAAACATGAGAAAACACAAGTGA 1473 0.4528 MGSCFSLESRSPHPTSPSSSFRKSKSNSKKRLGSRASSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRQDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNANWEVNVSGEEVLKEISINTAGGMNSEEAAFASADEESRVSVDAEETEKHPEIFLTLKETFLKAFKVMDRELKTHQSIDCFCSGTTAVTLVKQGRDLIIGNVGDSRAVLGTREKDNNLVAVQLTVDLKPNLPAEAERIHKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVLATDGIWDVLSNKEVVDIVAAAPRRATAARALVESAVRAWRFKYPTSKVDDCAVVCLFLDSDLQNVSSASHANKSSMEQASSAIQVHNGDGDVSGPTVLERSGTCRETNDASHEDNNEEVSKEEEIDAESETEWSALEGVSRVNTLLNLPRFVPDKEDKAAANMRKHK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2316 490 CDD PP2Cc 61 381 IPR001932 -
Apr4g2316 490 Pfam Protein phosphatase 2C 170 359 IPR001932 -
Apr4g2316 490 SMART PP2C_4 53 379 IPR001932 -
Apr4g2316 490 MobiDBLite consensus disorder prediction 408 457 - -
Apr4g2316 490 MobiDBLite consensus disorder prediction 1 32 - -
Apr4g2316 490 Gene3D - 57 383 IPR036457 -
Apr4g2316 490 MobiDBLite consensus disorder prediction 1 23 - -
Apr4g2316 490 ProSiteProfiles PPM-type phosphatase domain profile. 62 381 IPR001932 -
Apr4g2316 490 SUPERFAMILY PP2C-like 55 382 IPR036457 -
Apr4g2316 490 PANTHER ALPHABET, ISOFORM E-RELATED 1 470 - -
Apr4g2316 490 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2316 Apr-Chr4 32205201 32209205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2316 1 478 PP2C-type Phosphatase Gene Family AT3G02750 63.258 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2316 - - gmx:100790373 807.749