Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2310 ATGGAATCAGACAACCTTAATAACAACAACAACATTGACAACATGAAAAACGACAATTGTGACGACAAAACCTTTGTTCCTGATTCAAAAGAAGGAAGCTTTCTAGGAAAAAGAAGCATTGCTGAGAGAAGGGGTTTCAATTCCAATGCTGCAAGAATCAACACAGCACTCTTTCGCACTTCAACTTCAACAACCCCTTCACTTTCCCCTGTAGCTCGATCACCTCGTCTCACTATTCCTGTTGGCATTAGCCCCACTGCGTTGCTTGATTCTCCCATCATGCTTCCAAATTCTCAGGCCATGCCTTCTCCCACCACTGGCACATTCTTCACGGTGCCACCTCCTAGTCATGAAGGATCAGTGATCACACTTGAACAAGGGAATGTGGATGTGCCCACTGTCTCTGATGCTGCTGCCTCCTTCAAATTCAAGCCTCGTGTCCATTTAGATCCTAATCCTTTTCCTCCTCCCTACTCTGATTCTCTAACTCAGGTTTCTAGTAATTTCCACACAGTAAAGGGAGAAAATAGAGACAGCCAACTACCTGTTCAAGTTCAACCACCATTGAATTTTTCATTCCCAGCAGATTTTCCAAAAGGCCATTCTGCAAAAATTAATGAAGTCCATTCCTACAATGATATGAAAATGGTAAATGATGCTATTGTTAAGGCTAATACTGTTGAGATGCCACTGTTTGGCTCTGAGGAAGTTAGTGATGAAAGTGTTTTGCCTAAAAATGCTGTCCATGATGAGGAAATTAGTGGACAACCCTTTTCAGAAGGGGAACAGAAAGAGACATCCAACGCAACAGCAGCAGTAAGGACCTCAGAGGATGGTTACAATTGGAGGAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTACTACAAATGCACACAACCTGATTGTCCAGTCAAGAAAATGGTGGAAAGATCCCATGATGGCCAAATAACAGAAATTATTTACAGGGGTTATCATAACCATGCCAAACTGCACCCTGGTCGCCGAGCATCAACACTTTCTACTGATGAGATGTCAGACATGGGTGAAGACAGTACCTTTGCAAAAATTGATGGTGGGTTGGTTTGGAGAAACATTCAATCAGGAGTAAAACATGCAAAACACAATTTGCATGGGAAGGCTGATGGTCAAGAAAGGACATCATCAACTTCTGTTGCGACCGAGCTATCGGATCCTATATCAACTAACAAAGCTAAATCTCTAAATATGTTTGAATCAGAGGACACTCCCGAGCTTTCTTCTACACTTGCTAGTCATGATAATGAAGAAGATGGAGCCACTCAAACCCTCACATCAGTTGAAGAAGATGCTGAGGATGATGAATCAGAATTGAAAAGAAGGAAGAAAGATAGCTACTCAGTTGAACCAAAATTGCCTCCTAGAGCTGTTCGTGAGCCAAGAGTGGTAGTCCAAATTGAGAGTGATGTGGACATACTTGATGATGGTTATCGCTGGCGTAAGTATGGCCAGAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACGAGTGCTGGATGTACGGTAAGGAAACACGTGGAAAGGGCTTCACACAATCTAAAATATGTAATTACTACTTATGAGGGAAAGCATAATCATGAAGTGCCCACTGCTAGAACCAACAATCAGATGAACTCGAGTGATGGCGGTTTACCTCCGAATGGTGCTAATGGGCAAGTGGCTCTCACATTACCAGGAAGTGCTGGTATTCCAAAGCCTGAAACTCATCAAACTCTTGCACCTCATTTTGATAGAAAACCTGAATTTAGCAGCGATTTCTTAAGGCCTAGTTTGGTTGGAAGTTTCAGTAATGATATGAAGTTTGGGCCTTCTTCCATATGCCAAATGAAGTATCCTTCCTTGAATAATACCATGCCTTATGGCTCCTATGGACTGAACCCTGACCGTTGTGCTGCCCCTCAAGCTGGATCTATTGCCTCAATGTTCCCTGATTTTCCAATGCCACTACCATTGAATCTCCCCTCATCTGGAAACTTTTCTCTTTCTGGACTCAATTTTAACTGTGTAAAACCAATGAATCCTGTCCAGTCTTTTCTTTCCCCTCAGCAGGTAAAGGAGATTGATACAGGATTCCTAAGGCCTAAACAGGAACAAAAGGATGATACCATATATGGCACATGCTTACCCCCAATTGATCATGCAAACGCTTCACTCACTTATTCAGCAACTACACCATCCATTTATCAGCATGTCATGCAAAATTTCCCTTCCTAA 2277 0.4238 MESDNLNNNNNIDNMKNDNCDDKTFVPDSKEGSFLGKRSIAERRGFNSNAARINTALFRTSTSTTPSLSPVARSPRLTIPVGISPTALLDSPIMLPNSQAMPSPTTGTFFTVPPPSHEGSVITLEQGNVDVPTVSDAAASFKFKPRVHLDPNPFPPPYSDSLTQVSSNFHTVKGENRDSQLPVQVQPPLNFSFPADFPKGHSAKINEVHSYNDMKMVNDAIVKANTVEMPLFGSEEVSDESVLPKNAVHDEEISGQPFSEGEQKETSNATAAVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPDCPVKKMVERSHDGQITEIIYRGYHNHAKLHPGRRASTLSTDEMSDMGEDSTFAKIDGGLVWRNIQSGVKHAKHNLHGKADGQERTSSTSVATELSDPISTNKAKSLNMFESEDTPELSSTLASHDNEEDGATQTLTSVEEDAEDDESELKRRKKDSYSVEPKLPPRAVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKYVITTYEGKHNHEVPTARTNNQMNSSDGGLPPNGANGQVALTLPGSAGIPKPETHQTLAPHFDRKPEFSSDFLRPSLVGSFSNDMKFGPSSICQMKYPSLNNTMPYGSYGLNPDRCAAPQAGSIASMFPDFPMPLPLNLPSSGNFSLSGLNFNCVKPMNPVQSFLSPQQVKEIDTGFLRPKQEQKDDTIYGTCLPPIDHANASLTYSATTPSIYQHVMQNFPS* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2310 758 ProSiteProfiles WRKY domain profile. 485 550 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 MobiDBLite consensus disorder prediction 387 443 - -
Apr4g2310 758 Pfam WRKY DNA -binding domain 277 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 Pfam WRKY DNA -binding domain 491 548 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 MobiDBLite consensus disorder prediction 1 25 - -
Apr4g2310 758 MobiDBLite consensus disorder prediction 1 15 - -
Apr4g2310 758 MobiDBLite consensus disorder prediction 550 570 - -
Apr4g2310 758 MobiDBLite consensus disorder prediction 378 470 - -
Apr4g2310 758 MobiDBLite consensus disorder prediction 251 275 - -
Apr4g2310 758 Gene3D WRKY domain 262 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 SMART WRKY_cls 490 549 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 SMART WRKY_cls 276 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 MobiDBLite consensus disorder prediction 451 466 - -
Apr4g2310 758 SUPERFAMILY WRKY DNA-binding domain 273 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 MobiDBLite consensus disorder prediction 550 567 - -
Apr4g2310 758 Coils Coil 441 461 - -
Apr4g2310 758 MobiDBLite consensus disorder prediction 259 275 - -
Apr4g2310 758 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 28 732 IPR044810 GO:0003700
Apr4g2310 758 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 28 732 - -
Apr4g2310 758 ProSiteProfiles WRKY domain profile. 271 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 Gene3D WRKY domain 477 543 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g2310 758 SUPERFAMILY WRKY DNA-binding domain 483 550 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2310 Apr-Chr4 32145133 32149850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2310 40 553 WRKY Transcription Factor Family AT5G56270 40.381 3.36e-93 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g2310 WRKY 8.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2310 K18835 - gmx:100800211 1170.99