Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2296 ATGTTCAAATTCCTGAAAGAGGTTGTTGGTGGATCCGGAACCGGCCTCAAGGATCTCCCTTATACCATCGCCGAACCTTACCCTTCCGCTTGGGGCTCTTGGACTCATTCTCGCGCCACCTCCAAGGACGATAGTTCTCCGGTCTCCGTTTTCTCTCTTTCCGGCTCCAATGCTCAGGACGGACACTTAGCCGCCGCGCGCAACGGCGTTAAGCGTCTTCGAACGGTTAGGCATCCGAATATCTTGTCGTTTCTTCACAGTGCGGAGATTGAAACTTACGATGCTGGTTCTCCTAAGGTGACAATCTACATTGTGACCGAGCCTGTGATGCCGTTATCTGAGAAGATCAAGGAGTTAGGTCTTGAAGGTACTCAAAGGGATGAATATTATGCTTGGGGTCTTCATCAAATAGCTAAAGCCGTGAGCTTCTTAAATAGTGATTGTAAACTTGTTCATGGTAATATTTGCTTGGCTAGTGTTGTTGTGACACCAACATTGGATTGGAAGCTCCATGCTTTTGACGTTCTATCGGAGCTTGATGGGAGTAACGAAACTTCTTCTGGCCAAATGCTGCAATATGCATGGCTTGTTGGATCACAATACAAACCAATGGAGTTGGCGAAATCTGACTGGGATGTAATTAAGAAGTCTCCTCCATGGGCAATTGATTCTTGGGGCATGGGTTGCCTAATCTATGAGGTATTCTCTGGTCTGAGGTTGGGCAAAACAGAGGAGTTACGCAACACTGCTTCCATTCCCAAGTCTCTGCTTCCAGATTACCAACGGCTATTGAGTTCCATGCCTTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGAATATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTGAGTTTGAAAGATAGTGTTGAGAAAGACACCTTTTTCCGTAAGCTTCCAAATTTAGCTGAGCAACTTCCTCGCCAGATCGTGTTGAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCAGCTTTGGCTGCATTGCTGAAAATGGGTTCCTGGCTTTCAGCGGAGGAGTTTAATATCAAGGTGGTTCCAACAATTATAAAACTCTTTGCGTCCAATGACCGAGCTATTCGAGTCAGCCTTCTTCAGCATATTGATCAGTATGGAGAGTCATTATCTGCACAAGCTGTTGATGAGCAAGTTTACCCTCATGTTGCTACCGGGTTCTCCGATACATCTGCTTTTTTGAGAGAAATGACTCTCAAGTCAATGCTAATTTTGGCTCCGAAGCTGTCTCAAAGGACCATTTCAGGGTCGTTACTGAAGTATCTGTCAAAGTTACAGGTTGATGAAGAACCAGCAATTCGAACAAATACTACCATCATATTAGGCAATATTGGAAGTTACTTAAATGAAGGAACAAGAAAAAGAGTTTTGATTAATGCATTTACAGTCCGTGCCTTACGTGATACTTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGCGCCACCAGTTCCTACTATGACATCACCGAAGTTGCTACCCGGATTCTTCCTAATGTTGTTGTGCTCACAATTGATCCTGACAGTGACGTTAGAACTAAAGCATTTCAAGCTGTTGATCAGTTTTTGCTGATAGCAAAGCAATATTATGAAAAGACAAATGCAAGAGATACTGCTGGGGGTGCAAGTGTCGGAATCTCATTGACTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACCTTGAAGGGTAAACCTTCTGATCATGCTCCAATTGGTTCTGGGAATTCTACTGTAATCACTCCAACGTCTTCTAATGGAAACTCAGAAATGGAGACACCATCATCAGTACCAGTCCGTGTAAGCTCTACAGCAGATTTTGCTGAAGACCCTGTCCCTACATCTCCTACTACATCAACTGATGGCTGGGGTGAACTTGAGAATGGGATCCATGAAGAGCATGAGTGGGATGATTTGGAACCACTTGAAGAGACAAAGCCAACTCCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCAGTTTCTCAACCTATCTCACAGACAAAACAAGCCTCAAATTTGCTGTCGAAAAGTACACCAAAATTGAGCAAGGATGAGGATGATGATTTGTGGGGATCTATAGCAGCTCCTGCCCCAAAAACATCAAGACCTTTAAATTTGAAATCAGCTAGAACGGATGATGATGATCCCTGGGCTGCCATTGCTGCTCCTGCACCCACTACTAAAGCCAAGCCCTTATCAGCTGGCAGAGGTAGGGGAGCTAAACCTGCTGCTCCAAAATTAGGGGCTCAAAGGATAAACCGGACATCATCATCAGGTATCTAA 2379 0.4422 MFKFLKEVVGGSGTGLKDLPYTIAEPYPSAWGSWTHSRATSKDDSSPVSVFSLSGSNAQDGHLAAARNGVKRLRTVRHPNILSFLHSAEIETYDAGSPKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYYAWGLHQIAKAVSFLNSDCKLVHGNICLASVVVTPTLDWKLHAFDVLSELDGSNETSSGQMLQYAWLVGSQYKPMELAKSDWDVIKKSPPWAIDSWGMGCLIYEVFSGLRLGKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALAALLKMGSWLSAEEFNIKVVPTIIKLFASNDRAIRVSLLQHIDQYGESLSAQAVDEQVYPHVATGFSDTSAFLREMTLKSMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTIILGNIGSYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRTKAFQAVDQFLLIAKQYYEKTNARDTAGGASVGISLTPGNASLLGWAMSSLTLKGKPSDHAPIGSGNSTVITPTSSNGNSEMETPSSVPVRVSSTADFAEDPVPTSPTTSTDGWGELENGIHEEHEWDDLEPLEETKPTPALANIQAAQRRPVSQPISQTKQASNLLSKSTPKLSKDEDDDLWGSIAAPAPKTSRPLNLKSARTDDDDPWAAIAAPAPTTKAKPLSAGRGRGAKPAAPKLGAQRINRTSSSGI* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2296 792 Gene3D - 282 559 IPR011989 -
Apr4g2296 792 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Apr4g2296 792 MobiDBLite consensus disorder prediction 687 710 - -
Apr4g2296 792 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2296 792 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 789 - -
Apr4g2296 792 MobiDBLite consensus disorder prediction 686 792 - -
Apr4g2296 792 MobiDBLite consensus disorder prediction 601 654 - -
Apr4g2296 792 SUPERFAMILY Protein kinase-like (PK-like) 38 287 IPR011009 -
Apr4g2296 792 SMART serkin_6 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2296 792 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Apr4g2296 792 PANTHER - 1 789 - -
Apr4g2296 792 SUPERFAMILY ARM repeat 293 551 IPR016024 -
Apr4g2296 792 Gene3D Transferase(Phosphotransferase) domain 1 109 281 - -
Apr4g2296 792 MobiDBLite consensus disorder prediction 596 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2296 Apr-Chr4 32041036 32051655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2296 70 291 MAP Kinase Kinase Kinase AT5G66850 25.214 2.27e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Apr4g2296 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2296 K08876 - gmx:100789813 1343.56