Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2290 ATGGCTTCCCACGTTGCTCTTCTTCACCAAACTCCTCTTTCAATTCCCACTCATCAACGCTTTCACTTCAAACAAATTTGCATAAATGGACTCAAACCCATCACCATTTCTTCTTCTTCTTCTTCTTCTTATTGCTTTCCATGTTCCACAACAACTCAAAGAGGGTCTTCTTCCTCAGTGGTTACGTGTTCCTCTTTGAATGGGAGAGAACCAGATTCGGTGGATGATGATGATGGTGTCAGAAGCGTGGAGCGCATTCTTGAAGAGAAACGACGAGCTGCATTGTCTTCTAGGATTGCCTCAGGGGAATTCACTGTGAAACAGAAATTTGGTTTACTTTCTCTACTGAAGATCTTGGTAAAGTTTGGGGTGCCCAATGAAGTTTTGGAATTTTTGTTTGGTTGGGTTGAAGGGAGTGGCGTTTACCCCAAAATTCCTGAGGCAAAAGGGTCAATCAAAGCCATTCGAAGTGAGCCCTTCTTCATTCCCTTGTATGAACTTTACATCACATATGGTGGGATTTTCAGGTTGAACTTTGGACCAAAGTCCTTTCTGATAGTATCTGACCCATCTATTGCAAAACACATATTGAGAAACAATTCAAAGGCTTATTCAAAGGGTATATTGGCTGAGATCCTAGACTTTGTAATGGGGAAAGGTCTCATCCCAGCTGATGGGGAAATATGGCGAGTTAGACGACGTGCTATAGTCCCAGCATTGCATCAAAAGTATGTAGCGGCTATGATTAGCCTTTTTGGACAAGCTACAGATAGGCTCTGCAAGAAGCTAGATGCTGCTGCATCTGATGGAGAAGATGTCGAGATGGAGTCACTTTTCTCTAGATTGACCTTGGATATCATTGGCAAGGCAGTATTCAATTATGATTTTGATAGTTTATCAAATGACACTGGTATAGTTGAGGCTGTTTATGATGTATTGAGAGAAGCAGAAGATCGGAGTGTAGCTCCAATTCCAGTCTGGGAGATCCCAATATGGAAAGACATATCGCCACGTCAAAGGAAGGTTAATGCTGCTCTCAAATTGGTCAATGATACGCTCAATGATCTGATAGCAATATGCAAGAGAATGGTGGATGAAGAAGAGTTACAGTTTCATGAGGAGTACATGAATGAACAAGATCCAAGTATTCTGCACTTCCTGTTGGCATCAGGAGATGATGTGTCAAGCAAGCAACTCCGCGATGATTTAATGACAATGCTTATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTAACTAAGGAGCCTAGGGTCATGTCCAAGCTCCAAGAAGAGGTTGATTCTGTTCTTGGAGATCGATTTCCAACTATTGAAGACATGAAGAAACTCAAATATGCAACTCGAGTGATCAATGAGTCACTTAGGCTTTACCCACAGCCGCCTGTGTTAATTCGCCGCTCTCTTGAGGATGATGTTCTTGGAGAGTATTCTATTAAAAGAGGTGAAGATATATTTATATCTGTCTGGAACCTGCATCGCAGTCCAGAACTGTGGGATGATGCTGATAAGTTTGAACCTGAAAGATGGGCATTAGATGGACCAAACCCTAATGAGACGAATCAAAACTTCAAATATCTTCCGTTTGGTGGAGGACCACGGAAATGTGTAGGTGATTTGTTTGCTACATACGAGACTGTAGTAGCACTTGCAATGCTTGTTAGACGATTCAACTTTCAAATGGCAGTTGGAGCTCCACCAGTTGAGATGACTACTGGAGCTACAATTCATACGACACAAGGGTTGAGAATGACTGTAACACACCGTATAAAACCTCCCATTGTACCCTCATTACAGATGCCAACATTGGAAGTGGATCCATCTATGAGCATTTCTGATAAGGATGAAATAAATACAAAAGCCTGA 1902 0.4185 MASHVALLHQTPLSIPTHQRFHFKQICINGLKPITISSSSSSSYCFPCSTTTQRGSSSSVVTCSSLNGREPDSVDDDDGVRSVERILEEKRRAALSSRIASGEFTVKQKFGLLSLLKILVKFGVPNEVLEFLFGWVEGSGVYPKIPEAKGSIKAIRSEPFFIPLYELYITYGGIFRLNFGPKSFLIVSDPSIAKHILRNNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMISLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYDVLREAEDRSVAPIPVWEIPIWKDISPRQRKVNAALKLVNDTLNDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLTKEPRVMSKLQEEVDSVLGDRFPTIEDMKKLKYATRVINESLRLYPQPPVLIRRSLEDDVLGEYSIKRGEDIFISVWNLHRSPELWDDADKFEPERWALDGPNPNETNQNFKYLPFGGGPRKCVGDLFATYETVVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLRMTVTHRIKPPIVPSLQMPTLEVDPSMSISDKDEINTKA* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2290 633 PRINTS E-class P450 group I signature 168 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS E-class P450 group I signature 282 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS E-class P450 group I signature 398 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS E-class P450 group I signature 418 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS E-class P450 group I signature 460 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS E-class P450 group I signature 500 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS E-class P450 group I signature 538 548 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS E-class P450 group I signature 548 571 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS P450 superfamily signature 409 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS P450 superfamily signature 539 548 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PRINTS P450 superfamily signature 548 559 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 PANTHER - 98 604 - -
Apr4g2290 633 Pfam Cytochrome P450 160 584 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 541 550 IPR017972 GO:0005506|GO:0016705
Apr4g2290 633 PANTHER CYTOCHROME P450 FAMILY 4 98 604 - -
Apr4g2290 633 SUPERFAMILY Cytochrome P450 156 601 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g2290 633 Gene3D Cytochrome P450 143 606 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2290 Apr-Chr4 31976809 31983576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2290 68 631 Cytochrome P450 AT1G31800 77.425 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2290 K15747 - gmx:100780770 1096.26