Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2271 ATGGCCACAGCTCCTTCGCTTCTACACTCATCCGGCTCCTCATTTCTGGCTCAATTTCGTCCCTTTCAATCTTCTTCTTCTTCTTCACTGTTCACTCATGGAAACAGACATGGAAGTGCACTGGTGTCAGTGAGAGCCTCTGCTTCTGGGATTGTGCTTGTGGAGAAGTCTGAGTCAGAGAAGGTCAATAGGCTCAAAACAACTTACAATGAGAAAATTGTTCCCTTGCTCATGGAAGAGTTTTCTTACAGCAACAAACTCCAGGTGCCTAAAATTGAGAAGATTGTGGTTAACTGTGGTATCGGAGATGCTGCACAAAATGCAAAGGGTTTGGAAGCAGCAATAAATGATTTAGCACTGATCACAGGGCAGAGACCTGTTAAGACTCGAGCCAGAGCTTCTCTTGCCACCTTTAAGATCAGGGAAGGTCAACCGCTTGGGATTGCTGTTACACTTAGAGGAAATTTGATGTACTCATTCTTAGACCGTGTTATCAACTTGGGACTTCCTAGGACAAGAGATTTCCAAGGTGTGAATCCCAACAGCTTTGATGGGCATGGGAATTACTGCATTGGCATCAAGGACCAAGGTGTGTTCCCAGAGATCAGAGCTGATGTGGTTGGTAAGCCTAGGGGAATGGATGTCTGCATCGTGACAACGGCTAATACTGATCAAGAAGCACAGAAATTATTGGTTCTTATGGGCATGCCCTTCAGAGAGGGAGGTGGTCCTGCCACCACGGTTCGGAAAAAGAAGCTAAGGGCTCATCATTTTGATTCAAAATCAAAGGGAAAAGGAAGGAAGTAA 807 0.4535 MATAPSLLHSSGSSFLAQFRPFQSSSSSSLFTHGNRHGSALVSVRASASGIVLVEKSESEKVNRLKTTYNEKIVPLLMEEFSYSNKLQVPKIEKIVVNCGIGDAAQNAKGLEAAINDLALITGQRPVKTRARASLATFKIREGQPLGIAVTLRGNLMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYCIGIKDQGVFPEIRADVVGKPRGMDVCIVTTANTDQEAQKLLVLMGMPFREGGGPATTVRKKKLRAHHFDSKSKGKGRK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2271 268 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 57 240 IPR002132 GO:0003735|GO:0005840|GO:0006412
Apr4g2271 268 Pfam Ribosomal protein L5 85 141 IPR031310 -
Apr4g2271 268 ProSitePatterns Ribosomal protein L5 signature. 118 134 IPR020929 GO:0003735|GO:0005840|GO:0006412
Apr4g2271 268 SUPERFAMILY RL5-like 64 239 IPR022803 -
Apr4g2271 268 Gene3D - 56 240 IPR022803 -
Apr4g2271 268 Hamap 50S ribosomal protein L5 [rplE]. 62 240 IPR020930 GO:0003735|GO:0005840|GO:0006412
Apr4g2271 268 Pfam ribosomal L5P family C-terminus 145 238 IPR031309 -
Apr4g2271 268 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 57 240 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2271 77 218 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 26.761 2.12e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2271 K02931 - gmx:100818896 460.299